Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00341 ATGGCGGAAGCCGTGGAATCTTGCTGCGAGAACGAGAACTCGCAAACGAGCGATTGTGTAAGCGATTGCGTCTTTGTATGGGATGAGAACACTCAACTTTACTTCCATTCCAGTAGCGGGTTTTACCATGACCCTAATGCTGGCTGGTACTATAGCAGCAGAGATGGCCTTTATTACAAGTTTGAAGATGGAAACTATGTCCTTCTAGAGGCTGATGAAGGAGAAATATATCCATGCAAGAAAAGTACACCCGGAATTTCCACTGAGAATAGTCCTTGTCAACAAATTGATTGtaacaatgataaaaataactcTTCCCTTCTTGAAAGTAAATCTGAAGCGTTCCAGCTGATGAGAATCAAAACTGACGAAGCTGCTCTTGATCTTATTGATGGTACAAGCAGTTCAACTTGTGAAAATCCTCCTCCACCATCCTCAGAATGGTTAGAGGAGACACTTATCGATCTTTACTTGTCTGGCTACAAAAAGTCATCAGTTTGCGCAACTGATGATGCAATGACAATGCCCTTGGAAATAGATGATGGAGATAACTCCAAGTTAATAGCAGATGATACTTATGAACTGGAAGAAGGTGAGTGGATCCCAGATGATGATAATGGTGTAACCGATACAATAAGTATCATTGATGAAGGTAACCTGTCAGATGAAGATAAATGGCGAGCTCAGTATGGTCAAGTCACTGAATCAGGGAAAGAGATGGTTTCAGAGATTAGAGTGGTGGACTTGTGGGATTGGGAAATGGTTAGAGGATGTACAAAAGATGGAAAATATAAGGTTGCAAGGCTTGTTGGAAGACTGGTGAAACAATCTGCAAAGCTTCATCCTTCTATGCCTTCCAAGGGGGGAAAATTAAGATCTGCACCAATCTGTGAAGCACATCTTGATCTGGTACGAGTTAAAACAGGACAAGTGTACAAGTTGCGAAATCCTAGTGCAAAATATATAGCGTCATTGTCAATCTATGATTCTGCCAATCCAACAAAAGATTGGGGCTTCCCTCAGTTATCAATTAATAGCGATACTGCTCATCTATCTAAATCATGTGAAAGTACTGCTTCAGTTGCAGTTGGAATCCCCGAAGAGAAAGAATCTTCTAAGCTGGCAAGTCAGCTCTCTGCATCCAAAAAGCGCAAACCCATTCAATACAGAGATAGGGCTGCTGAAAGAAGAGTCTTGCATGGTGGGTTTGGTGTGGGTCCAGGACAGAAGAATCCAGTAGGCGGTGATAATGATACTCTATCATCACCTGTTGCTAGTTGTCCACAAGATGCTGCTGCAGAAGCCCTGGAAATTTCGTTCGGTGCAGGTAGCTTTGccagaaaaatattgaaaagcaTGGGCTGGAAAGAGGGGGAGGGGCTTGGAAGCTCTACAAAGGGCTTGGTGGAACCCATTCAAGCAGTAGGAAATATTGGCAACGCAGGCTTGGGGTGGTCTCGTGGCAAGGGTAAAGATTG 1478 0.4242 MAEAVESCCENENSQTSDCVSDCVFVWDENTQLYFHSSSGFYHDPNAGWYYSSRDGLYYKFEDGNYVLLEADEGEIYPCKKSTPGISTENSPCQQIDCNNDKNNSSLLESKSEAFQLMRIKTDEAALDLIDGTSSSTCENPPPPSSEWLEETLIDLYLSGYKKSSVCATDDAMTMPLEIDDGDNSKLIADDTYELEEGEWIPDDDNGVTDTISIIDEGNLSDEDKWRAQYGQVTESGKEMVSEIRVVDLWDWEMVRGCTKDGKYKVARLVGRLVKQSAKLHPSMPSKGGKLRSAPICEAHLDLVRVKTGQVYKLRNPSAKYIASLSIYDSANPTKDWGFPQLSINSDTAHLSKSCESTASVAVGIPEEKESSKLASQLSASKKRKPIQYRDRAAERRVLHGGFGVGPGQKNPVGGDNDTLSSPVASCPQDAAAEALEISFGAGSFARKILKSMGWKEGEGLGSSTKGLVEPIQAVGNIGNAGLGWSRGKGKD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00341 492 MobiDBLite consensus disorder prediction 401 421 - -
Bva05g00341 492 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 20 487 - -
Bva05g00341 492 Pfam G-patch domain 444 484 IPR000467 GO:0003676
Bva05g00341 492 PANTHER RNA-BINDING PROTEIN 20 487 - -
Bva05g00341 492 Pfam OCRE domain 24 63 IPR041591 -
Bva05g00341 492 SMART G-patch_5 440 486 IPR000467 GO:0003676
Bva05g00341 492 CDD OCRE 25 64 - -
Bva05g00341 492 ProSiteProfiles G-patch domain profile. 442 488 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00341 Bva-Chr5 1677301 1681592 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00341 - - gmx:100806477 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00341 05 1677301 1681592 Bva05g00341 05 1677301 1681592 ECH