Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00340 ATGGCTAAGATTCCAACCGTGTTCTCCCTGAGACACTGTTTTGTAGTGTCGCTTGCTTTAAATGTCAGTTTGGTTCTGAGAATGGTGTATGAATGTGACCAGGGCTGCAAAGGGGCCTGTTTGAAGACACAGAGCAGTCCATCAATGGCGGAACCGGGTTCTAAGTACGTGATGCACCAGTCACGTTTGGCTGTTTCCTCATCTTCGCCTTTGGTTAATTCTAATTCAACTCAGACAGCTCACCTAAAAGTCGGAGAAAGAATAATCAATCTTGACCACGGAGATCCACTAGTTTATGAGAAGTTTTGGCGACAAATGGGTGACAAGACCACAATTGTAATTCCAGGGTGGCAGTCTATGAGCTATTTTTCTGATCTGAGCAGCATTTGCTGGTTTCTGGAGCCTGAGTTTGCAAGGGAGGTGGTGAGGTTACACAATGTGGTAGGAAATGCTGTCACTGAGGGTCGTCACATTGTTGTTGGGACAGGTTCCTCTCAGCTCCTCTTGGCAGCTCTTTATGCTCTGTCTCCGCTAGATGCTGCTGAACCAATCAACGTGGTATCTGCTGCACCATATTACTCGTCGTACCCAGCAATGACTGATTACCAGAAGTCAGGGCTGTACAAATGGGCTGGTGAAGCGGGGAGTTTTGATAAAGAAGGGCCTTACATTGAGCTAGTTACTTCCCCCAACAACCCTGATGGACATGTCAGGCACTCTGTGGTCAATCGAAGCCAGGGATTCTTAGTCCATGACCTTGCCTATTATTGGCCACAGTACACTCCAATTTCATCCCCTGCAAATAATGATCTAACACTATTCACCGTCTCAAAAAGCACCGGTCATGCAGGAATGCGCATAGGGTGGGCTCTTGTCAAAGACAAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTCAACACCATAGGCGTCTCAAAGGATTCGCAGCTGAGGGCAGCAAAGGTTTTAAAGGCAGTGTCTAACACCTGTGAACAAGAAGGAAGCTCGCCAGAGGGTGAATCTTTCTTCAGATACAGTTACAATATTATGGAGCATAGGTGGAAGCACCTGAGAGCAGCAGTTGAACGTAGTGGAACGTTCAGTTTGCCCACCTTCTCTCCTGCATTGTGCAACTTTTTCAATGAGGTGTTGGAGCCTCATCCCGCTTTTGTGTGGTTAAAGTGTGAGGGAGACATAGAAGACTGTGAAAGATTCCTTCGAGGACACAAGATCTTAACAAGAAGTGGAATACAGTTTGGGGTTGGCCCAAAATATGTTAGAGTTAGCATGTTGGATACAGATGAAAATTTCATCCAGTTTATAGATAGGCTGTCTGCCATACACCCATG 1352 0.4593 MAKIPTVFSLRHCFVVSLALNVSLVLRMVYECDQGCKGACLKTQSSPSMAEPGSKYVMHQSRLAVSSSSPLVNSNSTQTAHLKVGERIINLDHGDPLVYEKFWRQMGDKTTIVIPGWQSMSYFSDLSSICWFLEPEFAREVVRLHNVVGNAVTEGRHIVVGTGSSQLLLAALYALSPLDAAEPINVVSAAPYYSSYPAMTDYQKSGLYKWAGEAGSFDKEGPYIELVTSPNNPDGHVRHSVVNRSQGFLVHDLAYYWPQYTPISSPANNDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLKAVSNTCEQEGSSPEGESFFRYSYNIMEHRWKHLRAAVERSGTFSLPTFSPALCNFFNEVLEPHPAFVWLKCEGDIEDCERFLRGHKILTRSGIQFGVGPKYVRVSMLDTDENFIQFIDRLSAIHP 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00340 450 Gene3D Aspartate Aminotransferase, domain 1 341 449 IPR015422 GO:0003824
Bva05g00340 450 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 3 449 - -
Bva05g00340 450 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 449 - -
Bva05g00340 450 CDD AAT_like 135 445 - -
Bva05g00340 450 Pfam Allinase 89 448 IPR006948 GO:0016846
Bva05g00340 450 Gene3D - 134 336 IPR015421 GO:0003824
Bva05g00340 450 SUPERFAMILY PLP-dependent transferases 83 447 IPR015424 -
Bva05g00340 450 Gene3D - 53 129 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00340 Bva-Chr5 1668230 1673085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00340 K16903 - gmx:100818522 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00340 05 1668230 1673085 Bva05g00340 05 1668230 1673085 ECH