Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00339 ATGGCTGACCTCCAACAAAACTACCGCCAAAACCAGCAGCACCCAACACAAGTGACCCAATCCCAAAGCAAGGCTCCTTCTAGTTCGCAAGTTATCGCACTCGTCACCATCATCCCCGTCGGTGCAATTCTTCTCATTCTCGGCGGCCTTACTCTCGCCGGAACCCTTATCGGTCTCGCCGTCACCGCCCCCCTCTTTGTCATCTTCAGCCCCGTCTTGATCCCTGCAGCACTTCTCATTGCCTTGGCAGTTACTGCATTTTTGACCTCTGGAGCGTTTGGAATTACGGCCGTTTCCTCCTTTGCGTGGCTCGCCAACTATGTCCGTCGATCACGGATACCGGACCAACTCGAACATTTAAAGCGTCGCTCGGAGGAGACGGCTGAGCATGCGGCCCAGAGAGTTAAGGAAGCGGCCCAGGAAGCTGGTCAGACAATCCAAAATACGGACCAAGAGTCGGCCCAGGCCGTCAAGACCAAGGCCCAAGAAGAAGGAAATACTAGTACCACTTG 512 0.5469 MADLQQNYRQNQQHPTQVTQSQSKAPSSSQVIALVTIIPVGAILLILGGLTLAGTLIGLAVTAPLFVIFSPVLIPAALLIALAVTAFLTSGAFGITAVSSFAWLANYVRRSRIPDQLEHLKRRSEETAEHAAQRVKEAAQEAGQTIQNTDQESAQAVKTKAQEEGNTSTT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00339 170 MobiDBLite consensus disorder prediction 1 24 - -
Bva05g00339 170 PANTHER OLEOSIN 5 161 IPR000136 GO:0012511|GO:0016021
Bva05g00339 170 Pfam Oleosin 29 138 IPR000136 GO:0012511|GO:0016021
Bva05g00339 170 MobiDBLite consensus disorder prediction 122 170 - -
Bva05g00339 170 MobiDBLite consensus disorder prediction 122 136 - -
Bva05g00339 170 MobiDBLite consensus disorder prediction 140 170 - -
Bva05g00339 170 PANTHER OLEOSIN 5 5 161 - -
Bva05g00339 170 Coils Coil 121 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00339 Bva-Chr5 1667370 1667882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00339 1 170 Lipid Metabolism Gene Families AT3G01570 42.135 1.38e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00339 - - pvy:116142309 127.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01401 06 10361429 10362615 Bva05g00339 05 1667370 1667882 ECH
Bva05g00339 05 1667370 1667882 Bva05g00339 05 1667370 1667882 ECH