Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva05g00329 | ATGTATCCACACCCGCGAAATTTCCCGTTCGTCTCATATGTGATATCTCGGCTCCCTTCTATAGGAGACAGAACCAGAACCCCCACCGCCGGTTCTGGTTCAGAGTTCCAAGAGATTGACCTCGAACAACCTCGTGATTCGCCATCGCGACCACCGTCCGATCCTTCTAGTTCTTCCCCTTCTTCTCCTTCGGGTTTAAACCACCCCGAGATTGTTGGCCGAATGCCTCGCCTCACAGACCCGAAACTGTTGGATGCCATGACCCGCGCCATCTCTGACGTGACCCAGACCCGATCCGTGCTCAAGCTTATCGGTGATCGACCCGACCATGAAATCGTCGACAATGCTAAGGCCCAGCTTGCCGATTTAGAAGCTCAGTTGTCCAGACAACTGGAAGAGATTGTGCTTACGCCAAGGCCCGATGATATCGACGATGAACAGTGGCGGGCACACCTGAGCACAAAAGAGAAGGAGATTAGGAACTTAGTTGAGAAAGATAAACGAATATACAAATCTGTGATACAGTTGGATGAGATGCACGAATCTTATGAGAAACTACTTCATGATGCAGAGAAGAGGTTAGTGAAAATTTATGAGTCAGCTAAGGGGGCTGTAGAAAATGAGGAAGATGATAAACTTGTTGAGGAAGAGGTTAACGAAGAGGTTGTGGGCATACTACAGGAGGCCAACGGAAAAGGGATGGAACGAGTGTATCTTTCGGGACGGAATCTGAGATTGCTGCCTGAGGTGTTTGGAAGGATTCCTGGGTTGGTGGTGCTTGATGTTTCAAGCAATCGGCTCAAGGTGATTCCCGACTCAGTTGCTGCACTAGAAAATCTTGAGGAGCTCAATCTCTCTTCAAATGTTTTGGAAGCATTGCCAGATTCAATTGGTTTGTTACACAAGTTGAGATTCCTGAATGTCTCTGGAAACAAGTTGAGCGCTCTTCCTGATTCCATCTGTCAGTGCAGGTCATTGGTGGAGCTGGATGCAAGCTTCAACAGTCTGTCGTATTTGCCAACGAACATAGGGAATGAGTTAGTTCACTTAGAGAAGCTTTCCATTCAATTGAACAAGCTGCGATCTCTTCCCTCATCTGTTTGTGAGATGAAGTCCTTGCGCTATCTGGATGCTCACTTCAACGAGTTACATGGACTTCCAACTGCAATAGGAAAATTGATTAATCTTCAAGTCCTTAACCTGAGCAGTAATTTCAGTGACCTTCATGAACTTCCTGAGACATTAAGTGATCTGACTAACCTCAAGGAATTGGATCTCAGCAACAATCAGATTCATGCTCTTCCTGATACATTTGGTCGCCTTGACAATTTGACCAAGCTCAACTTGGAACAGAACCCTCTTGAATTGCCACCAATTGAGATCGTTAAAAAAGGCGCTGAAGCCGTAAAGTCTTATATGGCTAAGAGGCGAATCGATATATTAGCCGAGGAAGATAGGAACAACACGCATGAAATGCAAGGACAAGCAGAGAATGGGTGGATAACACGTAGCACCTCCTGGTTGAAAAATTCCGTAACAGTTTCACCCAGAGATCCTTATCTTGAACAGCAGCTATG | 1577 | 0.461 | MYPHPRNFPFVSYVISRLPSIGDRTRTPTAGSGSEFQEIDLEQPRDSPSRPPSDPSSSSPSSPSGLNHPEIVGRMPRLTDPKLLDAMTRAISDVTQTRSVLKLIGDRPDHEIVDNAKAQLADLEAQLSRQLEEIVLTPRPDDIDDEQWRAHLSTKEKEIRNLVEKDKRIYKSVIQLDEMHESYEKLLHDAEKRLVKIYESAKGAVENEEDDKLVEEEVNEEVVGILQEANGKGMERVYLSGRNLRLLPEVFGRIPGLVVLDVSSNRLKVIPDSVAALENLEELNLSSNVLEALPDSIGLLHKLRFLNVSGNKLSALPDSICQCRSLVELDASFNSLSYLPTNIGNELVHLEKLSIQLNKLRSLPSSVCEMKSLRYLDAHFNELHGLPTAIGKLINLQVLNLSSNFSDLHELPETLSDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLEQNPLELPPIEIVKKGAEAVKSYMAKRRIDILAEEDRNNTHEMQGQAENGWITRSTSWLKNSVTVSPRDPYLEQQL | 525 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva05g00329 | 525 | SUPERFAMILY | L domain-like | 229 | 459 | - | - | |
| Bva05g00329 | 525 | Pfam | Leucine rich repeat | 255 | 313 | IPR001611 | GO:0005515 | |
| Bva05g00329 | 525 | Pfam | Leucine rich repeat | 395 | 454 | IPR001611 | GO:0005515 | |
| Bva05g00329 | 525 | PRINTS | Leucine-rich repeat signature | 418 | 431 | - | - | |
| Bva05g00329 | 525 | PRINTS | Leucine-rich repeat signature | 280 | 293 | - | - | |
| Bva05g00329 | 525 | ProSiteProfiles | Leucine-rich repeat profile. | 302 | 323 | IPR001611 | GO:0005515 | |
| Bva05g00329 | 525 | PANTHER | PLANT INTRACELLULAR RAS GROUP-RELATED LRR 9-RELATED | 47 | 517 | - | - | |
| Bva05g00329 | 525 | ProSiteProfiles | Leucine-rich repeat profile. | 279 | 300 | IPR001611 | GO:0005515 | |
| Bva05g00329 | 525 | ProSiteProfiles | Leucine-rich repeat profile. | 420 | 441 | IPR001611 | GO:0005515 | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 254 | 273 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 277 | 296 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 370 | 389 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 300 | 319 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 418 | 437 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 393 | 414 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 323 | 342 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_bac_2 | 347 | 366 | - | - | |
| Bva05g00329 | 525 | Gene3D | Ribonuclease Inhibitor | 349 | 474 | IPR032675 | - | |
| Bva05g00329 | 525 | MobiDBLite | consensus disorder prediction | 21 | 73 | - | - | |
| Bva05g00329 | 525 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 47 | 517 | - | - | |
| Bva05g00329 | 525 | MobiDBLite | consensus disorder prediction | 22 | 36 | - | - | |
| Bva05g00329 | 525 | Gene3D | Ribonuclease Inhibitor | 168 | 345 | IPR032675 | - | |
| Bva05g00329 | 525 | Coils | Coil | 173 | 193 | - | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 277 | 299 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 418 | 440 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 393 | 417 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 324 | 346 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 347 | 370 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 254 | 276 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 300 | 323 | IPR003591 | - | |
| Bva05g00329 | 525 | SMART | LRR_typ_2 | 441 | 464 | IPR003591 | - | |
| Bva05g00329 | 525 | Coils | Coil | 113 | 133 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva05g00329 | Bva-Chr5 | 1599222 | 1602884 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva05g00329 | 247 | 462 | Receptor kinase-like Gene Family | AT3G51740 | 34.081 | 3.08e-16 | 80.1 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva05g00329 | - | - | gmx:100782818 | 635.95 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva05g00329 | 05 | 1599222 | 1602884 | Bva06g01418 | 06 | 10448254 | 10451926 | BWGD | |
| Bva05g00329 | 05 | 1599222 | 1602884 | Bva05g00329 | 05 | 1599222 | 1602884 | ECH |