Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00311 ATGACAATCTCAGCGAAGCCCACGCTCAAGGAGGGATGCCTTACGGTGGGGGGAAAGGTGGCTTTGAGACAAGTTCCCAGAAACGTTGTCATTTCTCCGGTTGATGATGGTAGAGGATCGGCTTTTCTGGGTGCAACCTCCCCAATTCAAAGTTCCCGTCATGTTTTCACTCTTGGCTTTCTTGAGGGATATAAGTTGTTGTGTCTATTCAGAGCGAAAGTGTGGTGGATGATACCGCGATTTGGGAGATCAGCAAGTGAAATTCCAATTGAAACTCAATTGCTACTCCTAGAAGCAACACAAGAGTATGCCTTGCAACATGAGGATGAGGATGAGGATGAGGTTTCCTCTGACTCTGACTCAACAACACCAGAAGAAAACAACTTCTATGTTCTCTTCTTGCCTGTTTTGGATGGACAATTTCGTGCAACTCTGCAGGGAACTCCTGCTAATGAGCTTCAATTCTGCATTGAAAGTGGAGATGCCTCTGTCCAAACAAGCCAATCACTGGAGGCAGTATTTGTGAATTCAGGTGACAACCCATTTCAGCTGATCAAGGATTCAATCAAGATATTGGAGAGACACAAAGGAACTTTCTGTCATCTCGACAATAAAAAGACTCCTGCACATTTGGACTGGTTTGGATGGTGCACGTGGGATGCCTTTTATACTCAAGTAAATCCACAAGGCATCAAAGAAGGTCTTGGAAGTCTCTCACAAGGTGGTTGCTCACCAAAATTTCTGATCATTGATGATGGATGGCAAGAGACGGTCAATGAGTTCAGCAAAGAAGGTGAACCACCAATTGAAGGAACCCAGTTTGCTACAAGGCTGATGGAcatcaaagaaaacaagaagttCAGGAGTGCAggcttggatgattcatgtaTAAATCTGCATCACTTTGTTGATTctattaaagagaaatttggagTAAAATATGTTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTTAATCCCTTATCAGAAACTATGAAGAAATATAATCCGAAGCTTGTACATCCAATTCAGTCACCTGGTAGCACAGCGAACCTTAGAGACATAGCCATGGACAGCTTGGAAAAATATGGAGTGGGAATGATAGACCCACAGAAGACATATGAATTTTACAATGACTATCATAGTTATCTTGCAAGCTGTGGTGTTAATGGAGTCAAAGTAGATGTTCAAAATGTGATAGAAACCTTGGGTTCTGGGCATGGTGGACGTGTTTCATTGACTAGACACTATCAAGAAGCATTGGAACAATCCATAGCAAAGAACTTCAAGGACAATAACCTCATTTGCTGCATGTCCCACAACTCAGATTCAATTTACAGCTTAAAGAAGAGTGCAGTTGCGAGAGCATCAGAAGATTTCATGCCAAGAGAACCTACATTTCAAACTTTACACATTGCTTCTGTAGCTTTTAATAGTCTTCTTCTAGGGGAGATAATGGTGCCTGACTGGGACATGTTCCATAGCAAGCATGAAACGGCAGATTTCCATGGTGCAGCAAGAGCCATAGGGGGTTGTGCAGTGTATGTAAGTGACAAACCTGGCAATCATGATTTCAATATCCTCAAGAAGCTAGTACTTCCAGATGGATCTGTGCTGAGAGCAAGATATGCTGGCCGTCCTACTCGAGACTCTTTATTTGAAGATCCTGTCATGGATGGGAGAAGTTTGCTGAAGATTTGGAACTTGAATAAGCTAAGTGGGGTGATAGGCGTGTTTAATTGCCAAGGAGCAGGAAGCTGGCCACTGAAACCAGTGGAAGAAACACCCAAACGCATAACTATCTCAGGGAATGTGAGGCCCCTCGATGTTGAATTTCTCCAAGAGGTTGCAGGTGAAAATTGGAATGGAGATTGTGCAGTCTACGCCTTCAATACAGGCTTGCTTTCCAAGTTGCCAGGCAGAGGAAAACTAAAAGTGTCGTTGCAAACTCTTCAATGCGAAATATATACAGTGTCTCCAATCAGGGTGTTTGGTGATGTCCATTTTGCACCTATAGGATTGCTTGACATGTACAATTCAGGAGGAGCAGTAGACGCTCTGGACTGCAACTTGGGTGGTATTTCGGATTCAGAGTGctcaataaaaatcaaaggaaGAGGCCCTGGCCGTTTTGGAGCCTACTCAAGCATTAGACCCAAGCGTTGTGTGGTGGATATGAAGGAGGAGCACTTCTCCTACAACACTCAAGATGGGTTTTTGGTCATTAAACTTGATGGTGACGGAATTTTGAGGGAGATTCAGTTTGTATACTG 2282 0.4224 MTISAKPTLKEGCLTVGGKVALRQVPRNVVISPVDDGRGSAFLGATSPIQSSRHVFTLGFLEGYKLLCLFRAKVWWMIPRFGRSASEIPIETQLLLLEATQEYALQHEDEDEDEVSSDSDSTTPEENNFYVLFLPVLDGQFRATLQGTPANELQFCIESGDASVQTSQSLEAVFVNSGDNPFQLIKDSIKILERHKGTFCHLDNKKTPAHLDWFGWCTWDAFYTQVNPQGIKEGLGSLSQGGCSPKFLIIDDGWQETVNEFSKEGEPPIEGTQFATRLMDIKENKKFRSAGLDDSCINLHHFVDSIKEKFGVKYVYMWHALAGYWGGVNPLSETMKKYNPKLVHPIQSPGSTANLRDIAMDSLEKYGVGMIDPQKTYEFYNDYHSYLASCGVNGVKVDVQNVIETLGSGHGGRVSLTRHYQEALEQSIAKNFKDNNLICCMSHNSDSIYSLKKSAVARASEDFMPREPTFQTLHIASVAFNSLLLGEIMVPDWDMFHSKHETADFHGAARAIGGCAVYVSDKPGNHDFNILKKLVLPDGSVLRARYAGRPTRDSLFEDPVMDGRSLLKIWNLNKLSGVIGVFNCQGAGSWPLKPVEETPKRITISGNVRPLDVEFLQEVAGENWNGDCAVYAFNTGLLSKLPGRGKLKVSLQTLQCEIYTVSPIRVFGDVHFAPIGLLDMYNSGGAVDALDCNLGGISDSECSIKIKGRGPGRFGAYSSIRPKRCVVDMKEEHFSYNTQDGFLVIKLDGDGILREIQFVY 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00311 760 Gene3D Aldolase class I 207 534 IPR013785 -
Bva05g00311 760 PANTHER - 1 755 IPR008811 -
Bva05g00311 760 Pfam Raffinose synthase or seed imbibition protein Sip1 10 746 IPR008811 -
Bva05g00311 760 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 755 - -
Bva05g00311 760 SUPERFAMILY (Trans)glycosidases 208 535 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00311 Bva-Chr5 1520027 1524134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00311 1 747 Glycoside Hydrolase AT1G55740 47.958 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00311 - - gmx:100816978 1200.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00311 05 1520027 1524134 Bva05g00311 05 1520027 1524134 ECH