Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00298 ATGGAAGGAAAAAATCTCTTGTGGGTTGTTCTATCACTTACTTTGGTTCTTGGAGTTGTggaaagttttgattttcatgAGAAGGATTTGGTATCTGATGACAGTTTGTGGGATCTTTATGAGAGATGGAGGAGTCACCACACAGTTTCTCGAGATCTGAATGAAAAACACAAGCGCTTCAACGTGTTCAAAGCTAATGTGATGCATGTTCACAATACCAATAAAATGGAGAAGCCTTACAAGCTCAAATTGAACAAGTTTGCTGACATGACCAACCATGAATTTAGGAGCACTTATGCTTCCTCAAAGGTTAACCATCACAGGATGTTCCGCGGCACGCCACGTGGGAACGGGACCTTTATGTACAAGAATGTCCAAAGCGTTCCCCCTTCAGTGGATTGGAGGCAGAAAGGCGCTGTCACTGGCGTAAAAGATCAAGGCCAATGTGGTAGTTGCTGGGCGTTTTCAACCGTTGTAGCTGTTGAAGGTATTAACCAAATCAAGACACAAAAGCTAATCTCCTTGTCTGAGCAAGAGTTGGTAGATTGTGATACTCAGGTAAATGAAGGATGCAATGGCGGGCTAATGGATTATGCTTTTGAGTTCATCAAGCAAAAGGGTGGCATAACAACAGAGAGCTATTACCCTTACACAGCAGGAGATGGAACATGTGACGTTTCAAAGGTACATACTATACTGtgctcaattttattttattttaaatttaaatcaatagaTAGCTATGGGAAATTAAGATGCAAAAAACCATTAACATTGCAGCAGAAGAAACCAGCAGTGTCAATTGACGGGCATGAGAATGTTCCTGCTAACAATGAGGATGCGTTGCTCAAAGCTGTTGCCAACCAACCTGTATCTGTAGCCATAGATGCAGGGGGCTCTGATTTCCAGTTCTACTCAGAGGGAGTATTTACTGGAGGATGTGGGACTGATTTGGATCATGGGGTTGCAGTTGTGGGTTATGGAACAACTATTGATGGAACCAAGTATTGGATAGTGAAGAACTCTTGGGGAACCGAATGGGGAGAGAAGGGTTACATCAGAATGCAAAGGGGAACATCTGACAAGGAGGGACTCTGTGGTATAGCAATGGAGGCTTCTTATCCCATCAAGAACTCGTCCACTAACCCACCAGGCCCAACACAAAGTTCATCATCTCGTAAAGATGAACTTTG 1193 0.4191 MEGKNLLWVVLSLTLVLGVVESFDFHEKDLVSDDSLWDLYERWRSHHTVSRDLNEKHKRFNVFKANVMHVHNTNKMEKPYKLKLNKFADMTNHEFRSTYASSKVNHHRMFRGTPRGNGTFMYKNVQSVPPSVDWRQKGAVTGVKDQGQCGSCWAFSTVVAVEGINQIKTQKLISLSEQELVDCDTQVNEGCNGGLMDYAFEFIKQKGGITTESYYPYTAGDGTCDVSKVHTILCSILFYFKFKSIDSYGKLRCKKPLTLQQKKPAVSIDGHENVPANNEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGGCGTDLDHGVAVVGYGTTIDGTKYWIVKNSWGTEWGEKGYIRMQRGTSDKEGLCGIAMEASYPIKNSSTNPPGPTQSSSSRKDEL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00298 397 SUPERFAMILY Cysteine proteinases 35 377 IPR038765 -
Bva05g00298 397 CDD Peptidase_C1A 129 375 IPR039417 -
Bva05g00298 397 Pfam Papain family cysteine protease 128 376 IPR000668 GO:0006508|GO:0008234
Bva05g00298 397 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 20 236 - -
Bva05g00298 397 Gene3D Cysteine proteinases 14 378 - -
Bva05g00298 397 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 146 157 IPR000169 -
Bva05g00298 397 SMART pept_c1 128 376 IPR000668 GO:0006508|GO:0008234
Bva05g00298 397 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 236 - -
Bva05g00298 397 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 318 328 IPR025660 -
Bva05g00298 397 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Bva05g00298 397 PRINTS Papain cysteine protease (C1) family signature 336 342 IPR000668 GO:0006508|GO:0008234
Bva05g00298 397 PRINTS Papain cysteine protease (C1) family signature 320 330 IPR000668 GO:0006508|GO:0008234
Bva05g00298 397 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 261 383 - -
Bva05g00298 397 MobiDBLite consensus disorder prediction 374 391 - -
Bva05g00298 397 MobiDBLite consensus disorder prediction 374 397 - -
Bva05g00298 397 SMART Inhibitor_I29_2 40 95 IPR013201 -
Bva05g00298 397 PANTHER KDEL-TAILED CYSTEINE ENDOPEPTIDASE CEP1 261 383 - -
Bva05g00298 397 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 336 355 IPR025661 -
Bva05g00298 397 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00298 Bva-Chr5 1466290 1467702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00298 K16292 - zju:107418255 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00298 05 1466290 1467702 Bva06g01447 06 10559136 10560674 BWGD
Bva05g00298 05 1466290 1467702 Bva05g00298 05 1466290 1467702 ECH