Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00289 ATGGCTTTTTCTTTGGTATCCACCTCTTTTAAAATCACCGTCGTTACCATCTGcataatttcttcatttctgtCAATTGCTTGTGCAGAGGGAAAACCTCGACCCTTCAACAAGATTTACGCATTTGGGGATTCTTTCACTGACACTGGCAACACCAAGAATGGCAATGGCCCAAGTGGGTTTGGCCATGTGTCAAACTCTCCATATGGTAGCACCTATTTTCATCACTCCACAAACAGATACTCTGATGGAAGGCTTGTGATCGATTTCGTAGCTGAAGCACTGTCATTACCATACTTGCCCCCATACCTTCATTTCAAAGGCAATGATACTTTTGGGGTCAACTTCGCCGTTGCTGGCTCTactgcaataaaccatgagttCTTTGTCAAGAACAACCTTACCCTTGATCTCACCCCTCAGTCTATCCAAACCCAGCTTCTATGGTTCAACAGGTACTTAGAGGGACAGGGATGTAATGGAGCAGCATCAGATTGCAAAGTGGATTTTGATGATGCCCTGTTCTGGTTTGGTGAAATTGGAGTCAATGACTACGCATATACTCTTGGATCTTCAGTCTCACAAGACATCATTAGAAAGCTTGCAATGTACAGTGTCTCAGAAGCTATACGGACGCTGCTTCAGAAGGGTGCCAAATATGTAGTTGTGCAGGGTTTACCACTAACTGGGTGCTTGCCATTGGCTATGTATCTGGCTCCTGAAGACGACAGAGATGACATTGGATGCGTGAAAAGTGTCAACAACCAAAGCTACACCCACAACCTTGTCTTGCAAGCCAAGTTACAAGAACTAGGGAAACAGTATCCTAAAGCTGTTATAGCCTATGCTGATTACTGGAATGCCTACCGCACAGTCATGAAGAACCCAAGCCAATATGGATTCACCGAGACATTCCAAGTATGCTGTGGATCAGGAGGACCACCTCTCAACTTTGATGTGTTTGCTGTGTGTGGCACACCTAACGCCACCATCTGTTCGAGTCCTTCTCACTACATCAATTGGGATGGTGTTCACCTCACAGAGGCTATGTATAAAGTTGTTTCAAATATGTTCCTGCAAGGAAATTTCAGTCAACCTCCATTCAATGTTTTACTGGACATGAAAGGAAAGCAGGGATG 1139 0.4328 MAFSLVSTSFKITVVTICIISSFLSIACAEGKPRPFNKIYAFGDSFTDTGNTKNGNGPSGFGHVSNSPYGSTYFHHSTNRYSDGRLVIDFVAEALSLPYLPPYLHFKGNDTFGVNFAVAGSTAINHEFFVKNNLTLDLTPQSIQTQLLWFNRYLEGQGCNGAASDCKVDFDDALFWFGEIGVNDYAYTLGSSVSQDIIRKLAMYSVSEAIRTLLQKGAKYVVVQGLPLTGCLPLAMYLAPEDDRDDIGCVKSVNNQSYTHNLVLQAKLQELGKQYPKAVIAYADYWNAYRTVMKNPSQYGFTETFQVCCGSGGPPLNFDVFAVCGTPNATICSSPSHYINWDGVHLTEAMYKVVSNMFLQGNFSQPPFNVLLDMKGKQG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00289 379 SUPERFAMILY SGNH hydrolase 37 359 - -
Bva05g00289 379 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 10 376 - -
Bva05g00289 379 Gene3D SGNH hydrolase 28 362 IPR036514 -
Bva05g00289 379 CDD SGNH_plant_lipase_like 39 362 IPR035669 -
Bva05g00289 379 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 10 376 - -
Bva05g00289 379 Pfam GDSL-like Lipase/Acylhydrolase 39 356 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00289 Bva-Chr5 1410444 1412116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00289 39 362 Acyl Lipid Metabolism Gene Families AT4G10950 28.107 3.95e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00289 - - gmx:100810163 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01459 06 10657162 10658664 Bva05g00289 05 1410444 1412116 ECH
Bva05g00289 05 1410444 1412116 Bva05g00289 05 1410444 1412116 ECH