Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00274 ATGCAAATCCTTCAAACTCCGTATCTGTTCACTTTTCCTAAAACCATAAACCCTACCTCTAAGCCTTTCCACTTTCAGCGTCGTTCTCTGCACATCAAAATCCTCCCATTTTCCAGCAACTTCATCGCCAAGTCCGTTAGTTCTGATGAATTCCCTGTGGACGAAACCTTCCTTGATAAGTTCGCTCCCAAAGACAAGGAAACTGAAGATGAAGCTCGAACGCGCAACTGGATTGAGCGCGGCTGGGCCCCTTGGGAAGAAATCCTCACTCCAGAGGCCGATTTTGCGCGCAAGAGCTTGAATGAAGGCGAAGAAGTTCCGCTGCAATCTCCAGAAGCCATCGAAGCGTTCAAAATGTTGAGCCCAAGCTacaggaagaagaagatggaggAGATGGGGTTGACAGAGGATGACTATTACCGTAAACAATTTGAGATCAAGGGAGAGATACCGGAACCTCTGCAGACGTTGTGGGCGGGGCCAATGGTTTTTCGACTGGTGCCGCCAAGGGATTGGCCACCTAGAGGATGGGAGGTTGATCGAAAGGAGTTGGCATTTATACGCGAGGCACATAAATTAGAGTCAGTGAGAGTGAATTTGGAGGAGCTGGAAACTGGAGTCAGAACGGAAGTGGATGATATGTGCATTGAGAGGTATAACATGTTTCTCAAGCAATACAACGAGTGGGTGGCTGCAAATAAGGACAGATTGGAGGAAGAGTCTTACAAGCATGACCAAGATTACCATCCTGGTGGgaggaaaagaggaaaagactACAAGGAAGGCATGTATGAGCTTCCATACTATTATCCTGGCCAAATTTGTCAAGGGAAAGTGACGACATTGCACCTCTATCAAGGGGCCTTTGTTGACATTGGTGGTGTATATGATGGGTGGGTTCCCATAAAAAACAATGATTGGTATTGGATTCGCCATCACATAAAAGTTGGTATGCACGTCATAGTTGAAATTACGgCTAAGCGAGATCCATACCGTTTCCGGTTTCCTATCGAACTTCGTTTTGTCCATCCAAATATAGATCATCTTATCTTTAACAGATTTGACTTTCCACCAATCTTTCATCGTGATGAAGACACTAACCCAGACGAAATACGGCGTGATTGTGGAAGACCTCCTGTTCCCAGAAAAGATCCAGGAGACAAGCCAGAAGAAGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATAAATGCAGCCGAGCAAATGATTTTAGATGATATGGAGATTAATCCTGAAAAATACGAAGGTAAAAGCCTGTCGGACTTGACTGATGATGACGACTTCGATGAGGAAAACAGtgtaatatatacacaagcttattataagaaaacatTACTTCCAAAAATGATTCTGAAAACAAGCGTCAAAGAGCTTGATTTAGAGTCTGCGTTTGCTGAGCGTCAGCACCACAATAAACTAAGGAAAGAAGCagaagagagaggagaaaagTACAAAATTAGCAAACTGAGGCGCAATATTGAGATGGATGAGTATGACTTAATGCACTGGCGTAGATCTTTCGAAGAGCGAGAAGCCTTGATAAGAGACATCAGCTGTCGCAAGGCTCTTGGTCTGCCACTGGAAGAGCCAGGAAGGTACGTGAATGCTAGTTACTTTGGTAAAGATCAATACGATCCTTCAAGTCCTCTATACCGTTATGACTATTGGGGGGAACCCAAGAACTCAGAGAAGAGCAAGCAAGAGAGAATTGCAGATACCCATAACAAATCAATAGTGGGCAAGGGCACTTTTTGGTATGAGATGTCTTACGAAGATTGCATGAAGCAGCAGATGCAACGAGAAGCCCAGTCTGAGAGACAGCCGCATAAAGACGCTGAAGATGAAGTTACGGAACAAGGTGAAGACGACGATGACGACTTTGACTTCAGCATTCTGAGCAATCTCGGTAATAATTTATCAGATCAGCTTCATGTTAATGGGACTGAATCTTCTAGCATATCCGATGAGGACATGTTTGAGGATTG 2018 0.4242 MQILQTPYLFTFPKTINPTSKPFHFQRRSLHIKILPFSSNFIAKSVSSDEFPVDETFLDKFAPKDKETEDEARTRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLQSPEAIEAFKMLSPSYRKKKMEEMGLTEDDYYRKQFEIKGEIPEPLQTLWAGPMVFRLVPPRDWPPRGWEVDRKELAFIREAHKLESVRVNLEELETGVRTEVDDMCIERYNMFLKQYNEWVAANKDRLEEESYKHDQDYHPGGRKRGKDYKEGMYELPYYYPGQICQGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWYWIRHHIKVGMHVIVEITAKRDPYRFRFPIELRFVHPNIDHLIFNRFDFPPIFHRDEDTNPDEIRRDCGRPPVPRKDPGDKPEEEPLLSNHPYVDKLWQINAAEQMILDDMEINPEKYEGKSLSDLTDDDDFDEENSVIYTQAYYKKTLLPKMILKTSVKELDLESAFAERQHHNKLRKEAEERGEKYKISKLRRNIEMDEYDLMHWRRSFEEREALIRDISCRKALGLPLEEPGRYVNASYFGKDQYDPSSPLYRYDYWGEPKNSEKSKQERIADTHNKSIVGKGTFWYEMSYEDCMKQQMQREAQSERQPHKDAEDEVTEQGEDDDDDFDFSILSNLGNNLSDQLHVNGTESSSISDEDMFED 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00274 672 ProSiteProfiles S1 domain profile. 272 340 IPR003029 GO:0003676
Bva05g00274 672 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 38 658 IPR044967 GO:0000427|GO:0003723
Bva05g00274 672 MobiDBLite consensus disorder prediction 607 672 - -
Bva05g00274 672 MobiDBLite consensus disorder prediction 609 626 - -
Bva05g00274 672 MobiDBLite consensus disorder prediction 365 395 - -
Bva05g00274 672 MobiDBLite consensus disorder prediction 642 664 - -
Bva05g00274 672 SUPERFAMILY Nucleic acid-binding proteins 267 327 IPR012340 -
Bva05g00274 672 Coils Coil 471 491 - -
Bva05g00274 672 Gene3D - 269 340 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00274 - - jre:108986584 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00274 05 1343091 1349285 Bva05g00274 05 1343091 1349285 ECH