Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00266 ATGGCGTTATACATACTATACGAATCTGCTTCTGGGTTCGCTCTATTGCATGCTCATGGTCTTGATGAAATTGGGCAGAACGTCGAAGCTGTTCGGAACTCTGTTTCCGACTTGAACAGGTTCGGGAAGGTCGTGCAGCTTACAGCTTTTAATCCTTTTGAGTCTGCCCTTGATGCCCTTAAGCAGTGCAACGCCGTCTCTGAAGGCTTATTGACTGATGAATTGAGGAATTTTCTTGAGATCAATCTACCTAAAGTCAAGGAAGGTAAGAAGGCAAAGTTCAGTTTAGGAGTAGCAGATCCTAAAATTGGTTCGCAGGTCTCTGAAGTGACTAAAATTCCCTGCCAAAGTAATGAGTTTGTCAATGAACTGCTTCGTGGTGTACGGCTTCATTTTGACAGATTTATCAAGGATCTTAAGCCAGGAGATTTGGAGAAGGCCCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAGGTGAAATTTAATGTCAATCGAGTTGACAACATGGTAATTCAAGCAATCTTCCTTCTTGACACACTTGATAAGGATATTAATTCCTTCTCCATGAGAGTCAGAGAATGGTACTCATGGCATTTTCCTGAGTTGGTGAAGATTATAAGTGATAATTATCTGTATGCCAAAGTTTCCAAATATATTGAAGATAAGTCAAAGTTGGCAGAAGACAAAATCCCAGACTTAACAGAGATAGTTGGAGATGAAGATAAGGCTAAGGAGATTGTGGAAGCTGCCAAGGCATCCATGGGACAGGATTTGAGCCCAGTTGACCTGATCAATGTCCAGCAATTTGCACAGAGGGTAATGGACCTGTCTGAGTACAGAAGGAAGCTTTATGATTATCTTGTTACTAAGATGAATGACATTGCACCAAATTTGGCCTCTCTGATTGGTGAAGTTGTTGGTGCGCGTTTGATTTCCCATGCTGGCAGTCTTACGAATTTGGCTAAATGCCCCTCTTCCACTCTTCAAATTCTTGGTGCAGAGAAGGCATTGTTCAGGGCGTTGAAAACTAAAGGAAACACGCCCAAGTATGGCTTGATTTTCCATTCATCCTTTATTGGTCGGGCATCTGCCAGAAACAAAGGTCGAATGGCTCGCTATCTTGCAAACAAATGTTCGATTGCATCACGAATTGACTGCTTTTCTGAGAGTGGTACTACTGCGTTTGGAGAGAAACTCAAAGAACAAGTGGAGGAGCGACTTGACTTCTATGATAAGGGAGTTGCCCCTCGTAAGAACATAGATGTCATGAAGGCTGCTATTGAAAGTGCTGAAAACAAAGATACAGAGATGGAAACAGAGGAAGTGCACGTTGAACATTCGagcaagaaagagaagaagaagaagaagtcaAAAGCTGCTGCTGACGATGGTCAAAATATGGTTATAGATAAGTCCCCAGCAGTTACGAATGGTGGTGATGCTTCGGAGGAGCagaaatcagaaaagaaaaagaagaagaaagagaagaggaaatTGGACAATGAGATGGATGTCGATAATGAGGATGGTGCCAATGGAGTTGCCTCCGAGAAAGATGGAAATgtggaaaagaagaagaaaaagaagaaagataaaaaggaTGATGACGATGGAGAAATATTGGAGGCTGATAATgaaactagaaagaaaaagaagaagaaata 1667 0.3941 MALYILYESASGFALLHAHGLDEIGQNVEAVRNSVSDLNRFGKVVQLTAFNPFESALDALKQCNAVSEGLLTDELRNFLEINLPKVKEGKKAKFSLGVADPKIGSQVSEVTKIPCQSNEFVNELLRGVRLHFDRFIKDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIISDNYLYAKVSKYIEDKSKLAEDKIPDLTEIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTKGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSESGTTAFGEKLKEQVEERLDFYDKGVAPRKNIDVMKAAIESAENKDTEMETEEVHVEHSSKKEKKKKKSKAAADDGQNMVIDKSPAVTNGGDASEEQKSEKKKKKKEKRKLDNEMDVDNEDGANGVASEKDGNVEKKKKKKKDKKDDDDGEILEADNETRKKKKKK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00266 555 Coils Coil 483 510 - -
Bva05g00266 555 MobiDBLite consensus disorder prediction 432 449 - -
Bva05g00266 555 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Bva05g00266 555 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Bva05g00266 555 MobiDBLite consensus disorder prediction 432 555 - -
Bva05g00266 555 Gene3D Nop domain 299 423 IPR042239 -
Bva05g00266 555 Gene3D - 141 298 - -
Bva05g00266 555 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 499 IPR045056 GO:0030515|GO:0031428|GO:0032040
Bva05g00266 555 Coils Coil 421 441 - -
Bva05g00266 555 MobiDBLite consensus disorder prediction 519 549 - -
Bva05g00266 555 MobiDBLite consensus disorder prediction 483 506 - -
Bva05g00266 555 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Bva05g00266 555 SMART NOSIC_2 170 222 IPR012976 -
Bva05g00266 555 PANTHER NOP56-LIKE PRE RNA PROCESSING RIBONUCLEOPROTEIN 1 499 - -
Bva05g00266 555 SUPERFAMILY Nop domain 163 412 IPR036070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00266 Bva-Chr5 1306940 1310087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00266 K14564 - gmx:100779446 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00266 05 1306940 1310087 Bva05g00266 05 1306940 1310087 ECH