Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00265 ATGGCTCAGTTGAAGGCAGTTTCCGCATATTCCTGCCCCAACCTGTCTCCTTATGGACATAAAACGGaGCAGCTAATGCATCACCAATTATGGAAGGCAAAGCCATTTAAGGAGTTCGGGCCAAGGACAAGTGTTGGTGTCAGTAAACCTCAAGTTATAACAGCAGTCTTGAGCAGTGATACGGAGAAAGGAATTTCCGAATACAAAAAGAGTGGTGGGCTACGTGGAAAATTGGAGAAGGTTGTGCTAGCTTATAGTGGTGGCTTGGATACATCAATTGTTGTTCCGTGGCTAagAGAGAATTATGGTTGTGATGTCGTTTGCTTCACTGCTGATGTTGGCCAAGGCATAAAAGAGTTGGAAGGTTTAGAAGAAAAGGCCAAAGCCAGTGGGGCATCTCAGTTAGTGGTCAAGGACTTGAAGGAGGAATTTGTCAGAGATTACATATTCCCTTGTTTGCGTGCTGGTGCTATTTATGAGAGAAAGTATTTGCTTGGCACTTCAATGGCCCGCCCTGTTATTGCGAAGGCCATGGTTGATGTTGCAAAAGAAGTTGGAGCTGATGCTGTGTCTCATGGGTGTACAGGGAAAGGAAATGATCAGGTTCGGTTTGAGCTTACATTCTTTGCTCTGAATCCCAAGCTACACGTTGTGGCTCCATGGAGGGAGTGGGATATTACGGGCAGAGAAGACGCTATTGAGTATGCTAAGAAGCATAATGTACCTGTTCCTGTGACTAAGAAATCTATATACAGCAGGGACAGAAACCTTTGGCACCTTAGCCACGAGGGTGATATTTTGGAAGACCCAGCAAATGAACCTAAGAAGGATATGTATCTAATGTCTTCGGACCCAGAGGATGCTCCAGATCAAGCAGAATATGTTGAAATTGGGATAGAAGCTGGGCTTCCTGTTTCAGTTAACGGGAAGGAGCTTTCACCAGCATCTCTACTTGCTGAGCTCAATGAAATTGGTGGAAAACATGGAATTGGCCGTATTGACATGGTTGAAAATCGCCTGGTTGGTATGAAGAGTCGTGGTGTGTATGAAACTCCAGGCGGCACCATCCTCTTCGCTGCAGCACGTGAGTTAGAGTCTTTGACACTTGATCGAGAAACAATCCAAGTGAAAGATTCCTTAGCCCTTAAATATGCAGAACTAGTGTATGCTGGTAGATGGTTTGACCCACTTCGCGAGTCCATGGATGCCTTCATGGAGAAGATAACAGAGACCACAACAGGCTCTGTCACTCTGAAGTTATACAAAGGCTCGGTCACTGTAACAGGTCGGAGGAGCCCCTATAGCCTGTATAGGCAAGACATTTCATCGTTTGAGAGTGGACAGATATATGATCAAGCTGATGCTGCTGGGTTTATTCGGCTTTATGGTCTTCCAATGAGGGTCCGAGCAATGCTTGAGCAGGGAATATG 1430 0.4552 MAQLKAVSAYSCPNLSPYGHKTEQLMHHQLWKAKPFKEFGPRTSVGVSKPQVITAVLSSDTEKGISEYKKSGGLRGKLEKVVLAYSGGLDTSIVVPWLRENYGCDVVCFTADVGQGIKELEGLEEKAKASGASQLVVKDLKEEFVRDYIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAKEVGADAVSHGCTGKGNDQVRFELTFFALNPKLHVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHLSHEGDILEDPANEPKKDMYLMSSDPEDAPDQAEYVEIGIEAGLPVSVNGKELSPASLLAELNEIGGKHGIGRIDMVENRLVGMKSRGVYETPGGTILFAAARELESLTLDRETIQVKDSLALKYAELVYAGRWFDPLRESMDAFMEKITETTTGSVTLKLYKGSVTVTGRRSPYSLYRQDISSFESGQIYDQADAAGFIRLYGLPMRVRAMLEQGI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00265 476 ProSitePatterns Argininosuccinate synthase signature 2. 193 204 IPR018223 GO:0004055|GO:0005524|GO:0006526
Bva05g00265 476 Gene3D Argininosuccinate synthetase, chain A, domain 2 140 430 IPR024074 GO:0004055
Bva05g00265 476 Hamap Argininosuccinate synthase [argG]. 78 474 IPR023434 GO:0004055
Bva05g00265 476 ProSitePatterns Argininosuccinate synthase signature 1. 84 92 IPR018223 GO:0004055|GO:0005524|GO:0006526
Bva05g00265 476 Gene3D Single helix bin 450 475 - -
Bva05g00265 476 TIGRFAM argG: argininosuccinate synthase 80 469 IPR001518 GO:0004055|GO:0005524|GO:0006526
Bva05g00265 476 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 79 280 - -
Bva05g00265 476 Pfam Arginosuccinate synthase 82 468 IPR001518 GO:0004055|GO:0005524|GO:0006526
Bva05g00265 476 CDD Argininosuccinate_Synthase 81 465 IPR023434 GO:0004055
Bva05g00265 476 Gene3D HUPs 80 249 IPR014729 -
Bva05g00265 476 PANTHER ARGININOSUCCINATE SYNTHASE 77 474 IPR001518 GO:0004055|GO:0005524|GO:0006526
Bva05g00265 476 SUPERFAMILY Argininosuccinate synthetase, C-terminal domain 248 474 IPR024074 GO:0004055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00265 Bva-Chr5 1301345 1305454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00265 K01940 - gmx:100816038 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00265 05 1301345 1305454 Bva05g00265 05 1301345 1305454 ECH