Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva05g00237 | ATGGCCAGTCAAAGCGGATCTTCTCGAAGAAGTCTGTCGTTAATGAGCACgcaggaaaaaaagaaattctctgATAATGGAGGCTCGGATTCTGCTGTTGCCCGAAAATCTTTTTCCGCTTCGCGCCCTGTTGGATTAACGGGAGAGCGCACTGTAAAATCATTGCGACTCTCAAAGGCATTGACAGTACCCGATACAACAACTGTGTCTGAAGCTTGCCGTCGGATGGCTGCCCGTAGAGTTAATGCTCTTTTACTAACTGATTCTAATGCGTTGCTTTGTGGAATCCTCACAGACAAGGATATAGCAACAAGAGTTATTGCTCGTGAAGTCAGTATTGACGACACACCCGCTTCCAAGGTTATGACAAGGAATCCGGTATTTGTCCTTTCCGACACTCTTGCTGTGGAAGCCCTTCAGAAGATGGTTCAAGGAAAATTTAGACATTTACCTGTGGTGGAGAATGGAGAAGTTATTGCCATGCTTGACATAACAAAGTGTTTGTATGATGCTATTGCTCGCATGGAAAGGGCGTCTGAGAAAGGAAAAGCTATTGCAGCAGCTGTTGAAGGTGTTGAAAAACACTGGGGGGCATCCGCTTCTGGTTCCAGTTCATTCATTGAGACTCTCCGGGAGCGGATATTCAAGCCCTCCTTGTCTACAATTATTCCTGAGAATTCAAAGGTTGTAACAGTTTCACCAACTGAATCAGTTCTGTTAACAACAAAGAAGATGCTTGAATTTCGTGCAAGCTCTGCAGTTGTGGTAGTTGATGACAAACCTCATGGCATTCTTACTTCAAAGGATATCTTGATGCGGGTAATTGCACAAAATCTTCCTCCAGAGTCAACTCTTGTCGAGAAGGTCATGACTTCAAATCCAGAGTGTGCAACAATTGATACACCAATTGTTGATGCGCTTCACACTATGCATGATGGAAAATTTTTACATCTTCCTGTGGTAGATAGAGATGGCATTGTAGTTGCTGTGGTCGATGTGATCCATATCACTCATGCTGCTGTGGCAACTGTAAGTCAGGTTGGAAATGCTACTACCTTCAACCATGAAGCTGCTAGCTCCATGATGCAAAAATTTTGGGATTCAGCCATGGCCTTAACTCCAATTGATGACGATGATGAGACGAGAAGTGAAAATTCCTTGAGATTGCCTTCCGAAGGGGGAGACATCGGGCGATCTCTTCCGTTTCATTCGTCCGTCATGCCgaattcattttccttcaaaatacAAGATAAGAAGGGACGGATGCATAGATTCACATGCGATACTAGGAGCCTCACAGAAGTTATAACTTCAATCATTCAGAGACTCCGTGATGACATTGACCCCAACAACCTTCCACAAATTCTgTACGAAGATGAAGACCATGATAAAGTGGTGTTGGCTTCAGATAGTGATCTTGCCGCAGCTGTCGACCACGCAAGAGCAGCTGGTTTGAAGGGGTTGAGATTACATTTAGACTACTCAGGAACACCTCGTCGTAGGAAAGGTGGTTTGGTTTATGCTAATTCAGATGCATGGGCATCGGCATACAGTGCCGCTGCTGCTGGGGCTGCTATTGTTGCTGGCTTAGGCATATTGACATACTTGAAACGAACATG | 1619 | 0.4367 | MASQSGSSRRSLSLMSTQEKKKFSDNGGSDSAVARKSFSASRPVGLTGERTVKSLRLSKALTVPDTTTVSEACRRMAARRVNALLLTDSNALLCGILTDKDIATRVIAREVSIDDTPASKVMTRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGEVIAMLDITKCLYDAIARMERASEKGKAIAAAVEGVEKHWGASASGSSSFIETLRERIFKPSLSTIIPENSKVVTVSPTESVLLTTKKMLEFRASSAVVVVDDKPHGILTSKDILMRVIAQNLPPESTLVEKVMTSNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGIVVAVVDVIHITHAAVATVSQVGNATTFNHEAASSMMQKFWDSAMALTPIDDDDETRSENSLRLPSEGGDIGRSLPFHSSVMPNSFSFKIQDKKGRMHRFTCDTRSLTEVITSIIQRLRDDIDPNNLPQILYEDEDHDKVVLASDSDLAAAVDHARAAGLKGLRLHLDYSGTPRRRKGGLVYANSDAWASAYSAAAAGAAIVAGLGILTYLKRT | 539 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva05g00237 | 539 | MobiDBLite | consensus disorder prediction | 375 | 394 | - | - | |
| Bva05g00237 | 539 | Pfam | CBS domain | 58 | 104 | IPR000644 | - | |
| Bva05g00237 | 539 | Pfam | CBS domain | 119 | 163 | IPR000644 | - | |
| Bva05g00237 | 539 | Pfam | CBS domain | 286 | 339 | IPR000644 | - | |
| Bva05g00237 | 539 | Pfam | CBS domain | 226 | 272 | IPR000644 | - | |
| Bva05g00237 | 539 | ProSiteProfiles | CBS domain profile. | 290 | 351 | IPR000644 | - | |
| Bva05g00237 | 539 | SMART | cbs_1 | 59 | 107 | IPR000644 | - | |
| Bva05g00237 | 539 | SMART | cbs_1 | 125 | 169 | IPR000644 | - | |
| Bva05g00237 | 539 | SMART | cbs_1 | 293 | 341 | IPR000644 | - | |
| Bva05g00237 | 539 | SMART | cbs_1 | 228 | 275 | IPR000644 | - | |
| Bva05g00237 | 539 | SUPERFAMILY | CBS-domain pair | 49 | 167 | IPR046342 | - | |
| Bva05g00237 | 539 | ProSiteProfiles | PB1 domain profile. | 408 | 495 | IPR000270 | GO:0005515 | |
| Bva05g00237 | 539 | Pfam | PB1 domain | 411 | 493 | IPR000270 | GO:0005515 | |
| Bva05g00237 | 539 | SUPERFAMILY | CBS-domain pair | 227 | 340 | IPR046342 | - | |
| Bva05g00237 | 539 | CDD | CBS_pair_MUG70_1 | 57 | 173 | - | - | |
| Bva05g00237 | 539 | ProSiteProfiles | CBS domain profile. | 222 | 282 | IPR000644 | - | |
| Bva05g00237 | 539 | ProSiteProfiles | CBS domain profile. | 122 | 179 | IPR000644 | - | |
| Bva05g00237 | 539 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Bva05g00237 | 539 | PANTHER | CBS DOMAIN-CONTAINING PROTEIN CBSCBSPB4-RELATED | 25 | 526 | IPR034896 | - | |
| Bva05g00237 | 539 | CDD | CBS_pair_MUG70_2 | 226 | 342 | - | - | |
| Bva05g00237 | 539 | SMART | PB1_new | 410 | 495 | IPR000270 | GO:0005515 | |
| Bva05g00237 | 539 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Bva05g00237 | 539 | SUPERFAMILY | CAD & PB1 domains | 402 | 497 | - | - | |
| Bva05g00237 | 539 | Gene3D | - | 411 | 492 | - | - | |
| Bva05g00237 | 539 | ProSiteProfiles | CBS domain profile. | 56 | 113 | IPR000644 | - | |
| Bva05g00237 | 539 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 25 | 526 | - | - | |
| Bva05g00237 | 539 | Gene3D | - | 35 | 187 | IPR046342 | - | |
| Bva05g00237 | 539 | Gene3D | - | 218 | 344 | IPR046342 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva05g00237 | Bva-Chr5 | 1159778 | 1165211 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva05g00237 | - | - | twl:119984934 | 754.207 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva05g00237 | 05 | 1159778 | 1165211 | Bva05g00237 | 05 | 1159778 | 1165211 | ECH |