Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00230 ATGACATCAATGGCGGCAAGAAGTAATGTCACAAGAATTTTTCCAGGAGATTTTCGCAAggccaagaaagaaaatgtggaCGCCACAACTACATGGGAGGCTCTGAAGATGAATTTTCATGGTTTCGGCAATGCAAACGCATGGAACAATAAACGGAAAATGTCATTGGTGACTGCAAGTGCCCAAAGTAGTCCTCGCAGAGGGAAAACAATCAATGGAACCATGGTAAAGGGAGCCCGCGTGGAAGAGGGTTCTATTAACGGTGGAAAGTTGGCAAACGAAAGCGCAGTAGATGCAGCTCTTGGAACGAGCTTGCATGGAAGGTTCGTAGAAGACAGGTTTGTATATGGGCAAATTTTCGTGATCAGGTCTTATGAAATCGGACCTGATCAAACTGCTACCATGGAAACACTCATGAATTTCCTTCAGGAGACAGCATTGAATCATGTGACGTGCTCTGGGATTGGTGGGAATGGCTTTGGAGCAACCAGGGAGATGAGCATCAGGAAACTCATTTGGGTTGTTACACGAATTCAGGTTCAAGTTCAGAGTTATAGCAGAtgGGGAGATGTAATTGAGATTGATACTTGGGTTGATGCTGCTGGAAAGAATGGAATGCGAAGAGATTGGATCATCAGAGATCACAATACCAAAGAGATTATAACAAGAGCAACAAGCACATGGGTGGTCatgaacaaagaaacaagaagattATGCAAGATACCGGAAGAAGTGAAACAAGAGGTGTTTCCTTTCTACGTGAACCGGTTTGCCATTGCCAGTGAACAAACTGATTGTGAGAAGATCGACAAGCTCACTGATGATACTGCTGAGAGAATAAGATCCGGATTAGCTCCAAGGTGGAACGATATGGATGCTAACCAGCATGTCAACAATGTCAAATATATAGGATGGATATTAGAgAGCGTACCGATTCAAGTGTTACAAGACTATAATATGACAAGCTTGACTTTAGAGTATAGGCGTGAATGTAGGCAATCAAACTTGATGGAGTCATTGACAAGTCCAACAGCGAAGGTGATCGGTGACTCCAACAATAACTCCATAAACAGAAAACCAGACTTTGAGTGCACACACCTCCTTCGTATGCAAAGGGATAAAGCAGAGATAGTCCGAGCCAGAACGGAGTGGCATctaaagaacaaaaacaagtG 1175 0.4145 MTSMAARSNVTRIFPGDFRKAKKENVDATTTWEALKMNFHGFGNANAWNNKRKMSLVTASAQSSPRRGKTINGTMVKGARVEEGSINGGKLANESAVDAALGTSLHGRFVEDRFVYGQIFVIRSYEIGPDQTATMETLMNFLQETALNHVTCSGIGGNGFGATREMSIRKLIWVVTRIQVQVQSYSRWGDVIEIDTWVDAAGKNGMRRDWIIRDHNTKEIITRATSTWVVMNKETRRLCKIPEEVKQEVFPFYVNRFAIASEQTDCEKIDKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVPIQVLQDYNMTSLTLEYRRECRQSNLMESLTSPTAKVIGDSNNNSINRKPDFECTHLLRMQRDKAEIVRARTEWHLKNKNK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00230 391 Pfam Acyl-ACP thioesterase 115 385 IPR002864 GO:0006633|GO:0016790
Bva05g00230 391 Gene3D Hotdog Thioesterase 107 390 - -
Bva05g00230 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 271 386 IPR029069 -
Bva05g00230 391 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 46 389 - -
Bva05g00230 391 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 111 258 IPR029069 -
Bva05g00230 391 CDD 4HBT 120 232 - -
Bva05g00230 391 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 46 389 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00230 Bva-Chr5 1121911 1124012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00230 107 387 Acyl Lipid Metabolism Gene Families AT1G08510 56.940 1.75e-113 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00230 K10781 - gmx:100791281 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00230 05 1121911 1124012 Bva05g00230 05 1121911 1124012 ECH