Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00220 ATGGAAGCCCCGAAAGACCCCGATTCAAACCCGAGTGGCATCGACGATTCAGAGCTGGAGCTCTACACCATCCCGAGTCATTCAAGATGGTTTGTGTGGGATGAAATCCATGAAACTGAGAAAACAGCTTTGAAAGAATTCTTCGATGGAAGCTCATTCTCAAGAACTCCCAAAGTATATAAAGAATATAgagattttatcattaataaatacaGAGAAGAGCCTTCGAAGAGACTTACGTTCACCGAAGTGCGGAAATCGTTGGTGGGCGATGTCAGTTTGCTTCACaaggtttttattttcctgGAGAACTGGGGGTTGATTAATTATGGTGCACCTTCAACTCATACTGGTGATAATTTAGCTGCCAAGGATGAGGAAAGGTGCAAGGTTAGGATTGAAGGAGCCCCGAATGGTGTTCGCGTGGTGTCAACGCCTAATTCCTTGAAGCCAATTTCGGTGCCTCGGAACCCAAGGAGTACTGGAGATGCAGTTAGCAGCAGTACTGCTTACAAACTGCCCCCTTTGGCATCATTCTCTGATGTTTACGGTGATTTTATGAGGCAGAAGGAGTTGACTTGCGGGGTTTGCAGTGACATATGTGATTCTGGACACTACAAAAGTATTCAGGATGATTTCGTAATTTGTGTCAAATGTTTCAAAAACGGACTCTATGGGGAGAAAAGGTCCATGGATGATTTCAAATTACTCGAGTCTAACGAAAATAGTGGAAAGCACGGAGCTGTCTGGACCGAGGGAGAAATTCTACTTCTTTTAGAATCTGTTTTGAAACATGGGGATGACTGGGAACTCGTTGCTCAGAGTGTTCAAACCAAGAATAAACTTGATTGTATCTCAAAACTCATTGAACTGCCCTTTGGGGAGCTCATGTTGGGCTCTGCTCACAGAATTGGTAACAATAATAGTGCTAATGGCGTTGTGAACGGAGCAAAACAAGTTCAGTCATCTTCATCTGATCAACAAGAAACATCCAAGACAGAGGATCATATTTGTGAGCATACAAATGAAAATGCGCAGAATGGAGATGTGAAGCAAAGTCCTTCTAAAAGACAGCGCATTGATTCCCTTTCAGATTCCAGCTGTTCATTGATGAAGCAGGTAGGACTTATTTCTACTGTGGTAGACCCTCATATCACAGCCGCTGCTGCTGATGCTGCTGTAATGGCACTTTGTGAAGAGAACTTGTGTCCAAGGGAGATATTTGATGCTGAAGAAGATAATTATTCTAATGACTCATTTTTCAGCAATCTGAATGGTTATTCAGCAAGAGCCCTGGAGAGTGAAGGTTCAGAGGTAGAGAGATCTTCTCAGTCAGAAATGCGTGACAGATCCCCAAAGAAGGACGACATACCTTCGACGCTGCGCATAAGAGCTGCCATTGCAACTGCTCTTGGCGCAGCTGCTGCTCGTGCAAAGTTGTTGGCCGACCAGGAAGACAGAGAGATTGAGCATCAAGTAGCAATTATAATTGAAGCACAGAATAAGAAATTGCAGCACAAGATTAAACATTTTGAAGATCTGGAGCTGTTGATGGAAAAGGAATATGCCGAAATGGAAGAACTAAAACATTCTATCTTGACTGAGCGTATTGACGTACTGCAAAAGACATTTAGTGCTGGCATCTCAAGGTGGAAAGATTATCCACCCATGAAATCCTA 1679 0.4253 MEAPKDPDSNPSGIDDSELELYTIPSHSRWFVWDEIHETEKTALKEFFDGSSFSRTPKVYKEYRDFIINKYREEPSKRLTFTEVRKSLVGDVSLLHKVFIFLENWGLINYGAPSTHTGDNLAAKDEERCKVRIEGAPNGVRVVSTPNSLKPISVPRNPRSTGDAVSSSTAYKLPPLASFSDVYGDFMRQKELTCGVCSDICDSGHYKSIQDDFVICVKCFKNGLYGEKRSMDDFKLLESNENSGKHGAVWTEGEILLLLESVLKHGDDWELVAQSVQTKNKLDCISKLIELPFGELMLGSAHRIGNNNSANGVVNGAKQVQSSSSDQQETSKTEDHICEHTNENAQNGDVKQSPSKRQRIDSLSDSSCSLMKQVGLISTVVDPHITAAAADAAVMALCEENLCPREIFDAEEDNYSNDSFFSNLNGYSARALESEGSEVERSSQSEMRDRSPKKDDIPSTLRIRAAIATALGAAAARAKLLADQEDREIEHQVAIIIEAQNKKLQHKIKHFEDLELLMEKEYAEMEELKHSILTERIDVLQKTFSAGISRWKDYPPMKS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00220 559 SMART sant 246 294 IPR001005 -
Bva05g00220 559 SUPERFAMILY Homeodomain-like 242 286 IPR009057 -
Bva05g00220 559 Gene3D - 246 294 - -
Bva05g00220 559 PANTHER BRAHMA ASSOCIATED PROTEIN 155 KDA 18 558 - -
Bva05g00220 559 CDD SANT 250 287 IPR001005 -
Bva05g00220 559 ProSiteProfiles SANT domain profile. 245 296 IPR017884 -
Bva05g00220 559 PANTHER SWI/SNF COMPLEX-RELATED 18 558 - -
Bva05g00220 559 Pfam SWIRM domain 25 110 IPR007526 GO:0005515
Bva05g00220 559 Gene3D - 28 114 IPR036388 -
Bva05g00220 559 ProSiteProfiles SWIRM domain profile. 22 119 IPR007526 GO:0005515
Bva05g00220 559 MobiDBLite consensus disorder prediction 310 328 - -
Bva05g00220 559 MobiDBLite consensus disorder prediction 343 364 - -
Bva05g00220 559 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Bva05g00220 559 MobiDBLite consensus disorder prediction 434 456 - -
Bva05g00220 559 MobiDBLite consensus disorder prediction 310 364 - -
Bva05g00220 559 MobiDBLite consensus disorder prediction 432 456 - -
Bva05g00220 559 Pfam Myb-like DNA-binding domain 250 288 IPR001005 -
Bva05g00220 559 Coils Coil 511 531 - -
Bva05g00220 559 Pfam SWIRM-associated region 1 469 544 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00220 Bva-Chr5 1095718 1099102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00220 K11649 - gmx:100800135 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00220 05 1095718 1099102 Bva05g00220 05 1095718 1099102 ECH