Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00219 ATGGCTACGGAAACCCTAGAAGAGAAGATTCCTGAGCCAGAACCTCCTCTCAAAGACAAACAAGAATATGctgcagaaaaagaagaaaccaaaGTAGAACAAGATACTGAAAACCATGATTCCCTGCAAGTTGCCAATTCGCAAGAGGAAAATGCAGACGAGAAAGAACAACCGAGCAAGGAGTTAGGGGAGAAGAcagaggaaaggaaagagcCCAACGAGGAGGGGGCAGCGGATAAGGAGGAGCATGAAGGAGAGGGAGAAGAAAACGAGGAGGGGGAGGACGAGCCGGAGCATGGTAATGGGGAGAAGGAAGATGAAGGTGAAATCGGAGAGAAGACTAAGGCTAAGCAACGTAAACGTGATCAGAAGTCGAGCAAGCAACTGTCGGAGAAGAAAGCTGGAAACAATCCGGCTACACCCTCTAGCGATAGGCCAACTAGGGAGAGGAGAACAGTTGAACGGTACTCCGTCCCTTCGCCTGCTAAGTCTGGAAGGTCTTCCGCGAGCAAACCTTTGTCAATTGAAAAGGGCCGTGGCACACAGCTTAAGGACATTCCAAATGTGGCATTCAAGTTGTCCAAGAGGAAACCTGATGACAACCTGCAAATACTTCATACCATTCTTTTTGGGAAGAAAGCAAAGGCACACAgtttaaagagaaatatagGCCAATTTTCTGGCTATGTTTGGACTGAAAATGAGGAAAAACAGAGAGCTAAGGTAAAGGAGAAGCTTGACAAATgcgtgaaagaaaaattggtagACTTTTGTGATGTGCTTAACATTCCAATCAACAAGGCCACTGTGAAGAAGGAGGAACTGTCAGCAAAGGTATTGGAATTTTTGGAGTCCCCTCATGCTACAACTGATGCTCTACTTGCTGATAAAGAGCAGAAGGTTCAAAAACGAAAACGAAAGGTAGCAGCAAGCAAATCTTCAGAGGATGTAGCTGTGGAAACATCAGCGAAGaaacaaaagcaaGCATCACAAGTTGAGAAAAAGCGAAAACGTTCTTCAGAAATTGAGGATGAGGATGATAAAGTCGAACCTTCAGATGCGAAAAATGATTctcaagaagatgaagatgtgTCTGTGCCAAATGAAGAGAGTGATCGGGAGGAAAGTAAATCAGAGGAGGATGAGCAAGAGGAAGATAAATCAAAGGCTCACAAGACAGCTGCTAAAAAGATTGCAAAGGAGAGTTCAAGTGCTAAAAGTGGAGAAAAAGCTGCACCTGCTAGGAAGGCCACTGCAAAGGCTGCGAAGAGTCCTGAAAAAACtccaaaaaaaacaacttcaaaaaaaagtgtttctGATCGTGACAGTGTATCTGCTTCACTTCCAAAGTCAAAGCGATCTtcatccaagaaaaagaaacctgTGAGGGAAAATCAGGAGAGTGGGGTGAAGGCTACTAGCAAAAAGCAAACGGATAAATCCTCAGCAAAGGTGTTGGATAAGGATCAAGTAAAAGGCAAAAGCAATAAGAAGGCTAAGGAAGAACCTAGTAGGGAGGAGATGCACGCAGTTGTTGTTAATATTCTGAAGCAAGTTGATTTCGATACTGCAACTTTATCTGATATACTTCGGCAACTTGGTACCCACTTCGGTTTGGATTTAATGCATAGAAAAGCTGAGGTGAAAGATATAATTACAGATGTGATTAATAACATGTCTGATGAGGAAGATGAAGGAGAGGAAGCGGATAATGCTGATGTTGATGACCCAGATAAAgaggatgatgaagatgatgctTA 1760 0.3949 MATETLEEKIPEPEPPLKDKQEYAAEKEETKVEQDTENHDSLQVANSQEENADEKEQPSKELGEKTEERKEPNEEGAADKEEHEGEGEENEEGEDEPEHGNGEKEDEGEIGEKTKAKQRKRDQKSSKQLSEKKAGNNPATPSSDRPTRERRTVERYSVPSPAKSGRSSASKPLSIEKGRGTQLKDIPNVAFKLSKRKPDDNLQILHTILFGKKAKAHSLKRNIGQFSGYVWTENEEKQRAKVKEKLDKCVKEKLVDFCDVLNIPINKATVKKEELSAKVLEFLESPHATTDALLADKEQKVQKRKRKVAASKSSEDVAVETSAKKQKQASQVEKKRKRSSEIEDEDDKVEPSDAKNDSQEDEDVSVPNEESDREESKSEEDEQEEDKSKAHKTAAKKIAKESSSAKSGEKAAPARKATAKAAKSPEKTPKKTTSKKSVSDRDSVSASLPKSKRSSSKKKKPVRENQESGVKATSKKQTDKSSAKVLDKDQVKGKSNKKAKEEPSREEMHAVVVNILKQVDFDTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEGEEADNADVDDPDKEDDEDDA 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00219 586 PANTHER DEK PROTEIN 65 585 IPR044198 GO:0003677|GO:0006325
Bva05g00219 586 MobiDBLite consensus disorder prediction 161 175 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 294 362 - -
Bva05g00219 586 Gene3D - 495 558 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 1 38 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 420 438 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 103 129 - -
Bva05g00219 586 Coils Coil 232 252 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 382 404 - -
Bva05g00219 586 Pfam DEK C terminal domain 503 555 IPR014876 -
Bva05g00219 586 PANTHER OS01G0924900 PROTEIN 65 585 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 460 508 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 294 508 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 81 102 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 1 182 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 49 80 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 363 381 - -
Bva05g00219 586 MobiDBLite consensus disorder prediction 558 586 - -
Bva05g00219 586 SUPERFAMILY DEK C-terminal domain 496 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00219 Bva-Chr5 1090894 1095224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00219 K17046 - gmx:100813123 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00219 05 1090894 1095224 Bva05g00219 05 1090894 1095224 ECH