Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00213 ATGAGAACTTACCGCGTCTGGCAAGGCAGTAATGTATTTTTTCTTCACGGGAGGTTTATATTTGGACCTGATGCAAAATCTATATTTATGACGATATTCCTTGTTGTTGCCCCTGTTGCAATTTTCTGTACTTTTGTAGCCAGAAAACTGTGGGATGATTTTCCTCATCACTTGGGCTTGTCAATAATGGTCATAGTTATTGCTCTTACGATTTTTGTTATGATCGTCCTTCCACTGACCTCAGGAAGAGATCCTGGGATAGTACCACGTAATGCTTATCCTCCAGAGCCATATGATTATGATGGGACAAACGCCGATATAAACAACGGACTAACGCCACGGCCACGTTTACCCCGGACAAAGGACGTAATTGTCAATGGTATTCCCGTGAAGGTCAAATATTGTGATACCTGCCTACTCTATAGACCTCCCCGCTGTTCTCATTGTTCAGTGTGCGATAACTGTGTGGAGCGGTTTGATCATCATTGCCCTTGGGTGGGTCAATGTATCGGATTGCGGAATTACCGGTTCTACTATATGTTTGTCCTTTCTGCTACTCTTCTTTGCTTATATGTACATGGTTTTTGCTGGGTGTACATCAGAAGGATCATGGACTCTGAGGAGGTTTCAATTTGGAAGGCGATGACCAAAACTCCTGCTTCTATTGCGCTAATCATCTATACATTCATTTCTGTTTGGTTTGTTGGTGGTCTCACTGTTTTCCATACGTATCTCATCAGCACGAACCAGTCTACTTACGAGAATTTTAGATACCGATATGATCGCCAAGCCAATCCATATAATAGAGGGATAGTTGAGAACTTCAAAGAAGTATTATGCTTTAGCATTCCTCCATCCAAGAATAATTTCAGGTCTAAGATTCCAAAAGAGCCATTAGGTCCATCTGGAGGAGTGGCTGTTGGGTTTGTGAGCCCTTTAATGAGAAAAACCACTGGTGATGTGGAAATGGGGAGAAGGCCAGCTTACGAAGAGGATAGTGAATATAAAGATCGATCTATCGATGGTGAGGGACTTGACATGGATGATGAATTGGCTGATAATATGTCCCTTGATTTAAGTAGGACCCTTACCAGAGAAGGGAGGGAAAGAGAGAGTGGTTTATATGATAAGAATAACTGGGAAAGAAGCAGCGGAAAGTGGGACCAAACTCAGTCAAGTTCAAGAGAAAGGTG 1193 0.4241 MRTYRVWQGSNVFFLHGRFIFGPDAKSIFMTIFLVVAPVAIFCTFVARKLWDDFPHHLGLSIMVIVIALTIFVMIVLPLTSGRDPGIVPRNAYPPEPYDYDGTNADINNGLTPRPRLPRTKDVIVNGIPVKVKYCDTCLLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVLSATLLCLYVHGFCWVYIRRIMDSEEVSIWKAMTKTPASIALIIYTFISVWFVGGLTVFHTYLISTNQSTYENFRYRYDRQANPYNRGIVENFKEVLCFSIPPSKNNFRSKIPKEPLGPSGGVAVGFVSPLMRKTTGDVEMGRRPAYEEDSEYKDRSIDGEGLDMDDELADNMSLDLSRTLTREGRERESGLYDKNNWERSSGKWDQTQSSSRER 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00213 397 MobiDBLite consensus disorder prediction 321 397 - -
Bva05g00213 397 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 3 390 - -
Bva05g00213 397 PANTHER S-ACYLTRANSFERASE 3 390 - -
Bva05g00213 397 Pfam DHHC palmitoyltransferase 133 257 IPR001594 GO:0016409
Bva05g00213 397 ProSiteProfiles DHHC domain profile. 133 183 - -
Bva05g00213 397 MobiDBLite consensus disorder prediction 362 383 - -
Bva05g00213 397 MobiDBLite consensus disorder prediction 321 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00213 Bva-Chr5 1058923 1064773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00213 62 279 Lipid Metabolism Gene Families AT4G22750 28.511 1.56e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00213 - - vvi:100262775 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01541 06 11068113 11072369 Bva05g00213 05 1058923 1064773 ECH
Bva05g00213 05 1058923 1064773 Bva05g00213 05 1058923 1064773 ECH