Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00198 ATGTACTGGCCGACATGGAAGACCATCTTAGCAATGGAATTGCTTCTGTTGAATTGCTCCTTGGAGGTTCTCTGTTTCCCTTCTGATGAAGATAGGATTATTGGGCTTCCCGGACAACCCCACGTAAGCTTCCAACATTTCTCAGGATATGTCACAGTCGATGACGAGAAACAGAGAGCTCTGTTTTACTATTTTGTCGAATCTGAAACTGATCCAATTTCAAAGCCTCTCGTCCTCTGGCTCAATGGAGGACCTGGTTGCTCTTCTCTGGGAGTAGGTGCATTCTCTGAGAACGGGCCCTTTAGACCAAATGGGGAAGTTCTGATTAAAAACGAGTATAGTTGGAACAGAGAAGCCAACATGTTATATTTGGAGACACCAGTAGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTTTGAGACAATAAATGACGAGGCAACAGcCAGGGACAACCTTGTATTCTTGCAACGCTGGTTCGACAAGTTCCCACAATACAAGCACAGGGACTTGTTTCTAACTGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAAATCAACAAAAAGGAGGAGAGATTGAATCTTAAAGGCATAGCTTTGGGTAATCCAGTGCTAGAATATGCCACAGACTTCAATTCAAGGGCAGAGTTCTTCTGGTCTCACGGACTAATATCAGATTCAACGTACAAAATGTTCACTAGAGTGTGTAATTATTCACGGTACGTGAGTGAATACTACAGAGACTCGGTCTCCCCTCTTTGTTCGAAGGTGATGGGTCAAGTTAGCAAGGAAACAAGTAAATTTGTGGACAAATACGATGTGACCCTTGACGTGTGTATCTCATCGGTGCTTTCACAATCTAAAGTTGTTTGTCCCCAAACCCAACAAGCAAATGAGAGAATAGATGTATGCGTGGATGACAAAGTCACCAATTACCTAAACAGAAGAGATGTACACAAGGCACTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGcaaCATCTTGGACTATGATATGCTCAACCTGGAATTACCTACATTTCATTTAGTTGGATCACTTGTAAAAGCTGGAGTGCGGGTCTTAATTTACAGTGGAGATCAAGATTCTGTGATTCCATTGACTGGGAGCCGCAGATTGGTCCATAAACTTGCAAGGCAGTTAGGACTGAATACAACAGTACCTTACAGAGTATGGTTTGAAGGACAGCAGGTTGGTGGGTGGACTCAAGTTTATGGCAACGTGCTCTCGTTTGCCACCGTTCGGGGTGCCTCCCATGAAGTTCCTTTCTCGCAGCCTGAGAGGTCACTTGTGCTATTCAAGTCATTCTTGGAAGGCAGGCCTCTACCtgaaattttttg 1394 0.4426 MYWPTWKTILAMELLLLNCSLEVLCFPSDEDRIIGLPGQPHVSFQHFSGYVTVDDEKQRALFYYFVESETDPISKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNREANMLYLETPVGVGFSYAKGGSSFETINDEATARDNLVFLQRWFDKFPQYKHRDLFLTGESYAGHYVPQLAKLMIEINKKEERLNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTRVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVVCPQTQQANERIDVCVDDKVTNYLNRRDVHKALHARLVGVRKWDVCSNILDYDMLNLELPTFHLVGSLVKAGVRVLIYSGDQDSVIPLTGSRRLVHKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPEIF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00198 464 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Bva05g00198 464 ProSitePatterns Serine carboxypeptidases, histidine active site. 427 444 IPR033124 GO:0004185
Bva05g00198 464 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 462 IPR001563 GO:0004185|GO:0006508
Bva05g00198 464 PANTHER CARBOXYPEPTIDASE 25 462 - -
Bva05g00198 464 Gene3D - 359 457 - -
Bva05g00198 464 Gene3D - 312 348 - -
Bva05g00198 464 SUPERFAMILY alpha/beta-Hydrolases 35 461 IPR029058 -
Bva05g00198 464 Gene3D alpha/beta hydrolase 28 289 IPR029058 -
Bva05g00198 464 Pfam Serine carboxypeptidase 38 457 IPR001563 GO:0004185|GO:0006508
Bva05g00198 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Bva05g00198 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Bva05g00198 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Bva05g00198 464 PRINTS Carboxypeptidase C serine protease (S10) family signature 427 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00198 Bva-Chr5 985891 988590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00198 320 460 Calmodulin-binding Proteins AT2G22960 29.078 5.23e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00198 K16297 - gmx:100795668 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00198 05 985891 988590 Bva05g00198 05 985891 988590 ECH