Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00189 ATGGaaccagaagaagaaaaaaaatgcgaAAACACTAATTCTCCTTCTACGCCGGTTGGAAAAGCACAAACAGAGGTTTACAATGACACGAGCAATGAAAGAACCAAAGCCACAAGACACCCTCGATGGACCAGATGGGAAACACTTGTTCTCATAGAGGCTAAGAAAGTGGTCGAGAATGGGGGAAAACGGGCTTGCCCTTACACATCAGCCTCTGGGTCTACTCAGTTTGAACCAAAATGGGATTTGGTCTCATCGTTCTGTGAACAACAGGGTGTGCACAGAGGACCTGTTCAGTGTCGAAAAAGATGGAGCAATCTTCTCAGCGATTTCAAGAAAATCCAGAAATGGGAGTCAGGTATAAAGGTGGAGGCTGAATCGTTCTGGGTGATGAGAAACGACGAAAGGAGAGAAAGGAAGTTGCCAGGTTTCTTTGATAGAGAGGCGTTCAATGTTTTGGACGGAAAGTTATCTACGGCTACAGCTCTTCCGTTGGCACGGACCAAAACGACATCAAGATCAAAGAATACTGAtggagaagatgatgatggtCAAGATGAGGAGGCTGAGGCCATTATTGACAGTGACAAAATGGGTTGGACTCTGAGTACAGAGGAGGAAACCGCTGAAACAAGAACTGCCACAAAGAAAGTGACCACTTTTAATGAACCAGGTACCAAGGAAACAATCATGGCTGACACTGCTCCACTGCCTCATTCAGTACTTCAAGAAGAATCCAACCATTG 746 0.4303 MEPEEEKKCENTNSPSTPVGKAQTEVYNDTSNERTKATRHPRWTRWETLVLIEAKKVVENGGKRACPYTSASGSTQFEPKWDLVSSFCEQQGVHRGPVQCRKRWSNLLSDFKKIQKWESGIKVEAESFWVMRNDERRERKLPGFFDREAFNVLDGKLSTATALPLARTKTTSRSKNTDGEDDDGQDEEAEAIIDSDKMGWTLSTEEETAETRTATKKVTTFNEPGTKETIMADTAPLPHSVLQEESNH 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00189 248 Pfam Myb/SANT-like DNA-binding domain 41 130 IPR044822 -
Bva05g00189 248 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 23 223 - -
Bva05g00189 248 MobiDBLite consensus disorder prediction 202 227 - -
Bva05g00189 248 MobiDBLite consensus disorder prediction 164 248 - -
Bva05g00189 248 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 23 223 - -
Bva05g00189 248 ProSiteProfiles Myb-like domain profile. 35 108 IPR001005 -
Bva05g00189 248 SUPERFAMILY Homeodomain-like 41 113 IPR009057 -
Bva05g00189 248 MobiDBLite consensus disorder prediction 12 31 - -
Bva05g00189 248 MobiDBLite consensus disorder prediction 1 39 - -
Bva05g00189 248 Gene3D - 43 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00189 Bva-Chr5 929664 931181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00189 - - gmx:100793052 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01571 06 11232256 11233696 Bva05g00189 05 929664 931181 ECH
Bva05g00189 05 929664 931181 Bva05g00189 05 929664 931181 ECH