Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00186 atggtagAGAACGGTGACTACAATGGTGGAAGTCGTAGCAGAGAAGAGCAGGAGGAGGCATTGGTAGCGTTAATCGAACATCGTACCCGTGAAGTGAAAAATCTCCGTCAACGCATCTCCTATTACACATCTCAGCTTGAAGAAGCAGAAAATAGGTTGCAAGATTCTGAATCCAAATTAGCTCGTCTTCGAGGTCAAACTTATGTGGCTTCATCTCGAAATTGCTTGACAGACGAACCTAAAACTATTAAGATGGAGCGCAGGTCAATCAGTCCAGTTCACAGAAATGAAGGTTCCTCCAGAAACCAACATCATTCTAAGCCAGAACTTCTTATTCCTGCTGCGAGTCCAAGAATCTCACAACCTATGTTATTGCAAGGGTCTTCTGCAAAAGCCTCAATAAATTCTGGCTCTCAAGTGAGTCCATCCGTCTCGACTCATTCTACTACTGGTGCTAGAGTCAAAACTGATAAACCCCAAAGGCTTTTTACGGAGCAGGAGCATATTGAAATCAAGGACAGAGGGACAAAAAGGAAGTTTGAGCAGAAAGAACATAAGGAATTGATTCCTTTAGTAAACAGTAGTTCTTCACCATGCTTAGTCCGCTGTCAGACAAACAACCACATCTCAAGTCAACACAAGAGGAAGTTGCGGAGTCTTGCTTTGTGTCCCGTGAATGATCTGCTTTTTGTGACCAcTGCTTTGGATGGAATGGTAAACTTGTGGCAAGTTCAGTCTAAGGGTTTAGGAGCATCTTTGCTTAGCACTACTGATTGTCTATCCCAAAAGCAGAGGAGATGGCCAGAAGATATATGTTGGCACCCAGATGGAAACAGCCTGTTTTTAGTGTACAGTGCTGACGGGGGAGATTCTCAAATATCAGTTATGAATCTTTACAAAAAACAAGGGGGGGAACGTGTAAAATTCTTAGAGAACAAGCCTCATGTTAAGGGTATTATTAATAGCATTGTTTTTATGCCCGGGGAAGATACCAGTTTTGTAACGGGGGGCAGTGATCACGCTGTTGTACTTTGGAGTGAGAAGGATAGTGAGGGCATTTGGAAGCCAAAAGCTTTGCACAGGAATAACCATTCATCTGCTGTCATGGGAGTCGCTGGTCTACAGCAAAAACATACAGTTTTGTCTGCTGGTGCAGACAAGAGAATTATTGGGTGTGATGCTAATTCAGGAACAGTAACTTACAAGCATCAGATTGACAGTAAATGTATGAGTGTGCTGCCAAATCCATGCgacttaaatttgtttatggtTCAAACAGGGACAGCCCAGAGGCAGCTTCGATTATTTGATATCAGATTGAGGCAGACGGAACTCCATGCTTTTGGGTGGAAGCAAGAGAGTAGTGAATCTCAGTCAGCTTTGATAAATCAGGCTTGGTCTCCTGATGGAATGTATATAACATCAGGATCAGCAGATCCTATGATTCACATCTTTGATATTAGGTATACTGCTAACAAGCCTTCCCAATCTGTTAGAGCTCATCAGAAACGAGTCTTCAAAGCTGTGTGGCTTCAgtctcttcctcttctcatTTCCATATCATCCGATCTCAACATTGGGTTACACAAGCTCTTGCAGAGCGGTGGCCGCATGAGCGCCGTCGAGATTCCGGCAGGTGAAATTAACCACTGCAGCAATTCTTGTTCTCGAGCTTGGTTTCTCATTGGTATTGGtactgtttctttttcaacacAAGGATTCCTCTTGTTATATGTTTG 1739 0.4181 MVENGDYNGGSRSREEQEEALVALIEHRTREVKNLRQRISYYTSQLEEAENRLQDSESKLARLRGQTYVASSRNCLTDEPKTIKMERRSISPVHRNEGSSRNQHHSKPELLIPAASPRISQPMLLQGSSAKASINSGSQVSPSVSTHSTTGARVKTDKPQRLFTEQEHIEIKDRGTKRKFEQKEHKELIPLVNSSSSPCLVRCQTNNHISSQHKRKLRSLALCPVNDLLFVTTALDGMVNLWQVQSKGLGASLLSTTDCLSQKQRRWPEDICWHPDGNSLFLVYSADGGDSQISVMNLYKKQGGERVKFLENKPHVKGIINSIVFMPGEDTSFVTGGSDHAVVLWSEKDSEGIWKPKALHRNNHSSAVMGVAGLQQKHTVLSAGADKRIIGCDANSGTVTYKHQIDSKCMSVLPNPCDLNLFMVQTGTAQRQLRLFDIRLRQTELHAFGWKQESSESQSALINQAWSPDGMYITSGSADPMIHIFDIRYTANKPSQSVRAHQKRVFKAVWLQSLPLLISISSDLNIGLHKLL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00186 532 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 10 531 - -
Bva05g00186 532 MobiDBLite consensus disorder prediction 87 108 - -
Bva05g00186 532 SMART WD40_4 449 486 IPR001680 GO:0005515
Bva05g00186 532 SMART WD40_4 303 346 IPR001680 GO:0005515
Bva05g00186 532 SMART WD40_4 204 243 IPR001680 GO:0005515
Bva05g00186 532 SMART WD40_4 355 393 IPR001680 GO:0005515
Bva05g00186 532 SMART WD40_4 491 530 IPR001680 GO:0005515
Bva05g00186 532 SMART WD40_4 256 297 IPR001680 GO:0005515
Bva05g00186 532 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 10 531 - -
Bva05g00186 532 Gene3D - 354 531 IPR015943 GO:0005515
Bva05g00186 532 Coils Coil 32 66 - -
Bva05g00186 532 MobiDBLite consensus disorder prediction 87 104 - -
Bva05g00186 532 SUPERFAMILY WD40 repeat-like 209 529 IPR036322 GO:0005515
Bva05g00186 532 MobiDBLite consensus disorder prediction 133 154 - -
Bva05g00186 532 Pfam WD domain, G-beta repeat 463 486 IPR001680 GO:0005515
Bva05g00186 532 Gene3D - 121 351 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00186 Bva-Chr5 905738 911331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00186 - - gmx:100799587 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00186 05 905738 911331 Bva05g00186 05 905738 911331 ECH