Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00117 ATGGTGAGGCTCACTGCCGACTTGATCTGGAAGAGCCCTCATTTTTTCAATGCCATAAAGGAGCGAGAGTTAGACCTCCGAGGCAACAAGATAGCTGTAATCGAAAACTTGGGAGCTACTGAGGACCAATTTGATACGATTGACCTATCTGACAATGAGATTGTCAAGCTGGAAAACCTACCATATCTTAATCGTTTGGGTACCCTTCTCGTAAATAACAATAGAATTACAAGAATTAATCCTAACATCGGAGAGTTCCTGCCAAAATTACACACCTTAGTTCTCACAAACAACAGGCTTGTCAACTTGGTAGAGATTGATCCTCTAGCATCCCTTCCGAAACTGCAGTTTCTTAGTCTTTTGGACAACAATATTACGAAGAAACCAAATTACAGGCTCTATGTCATTAGCAAACTGAAGCACCTTCGGGTTTTAGATTTcaagaaagttaaaaataaaGAGAGGTTGGAAGCCAAAAACATGTTTGCTTCAAAAGAAGCTGAAGAAGTTCAAAGGACACCAGCTAAGACGTTTTCACCTGTTGAAACTCCAATTGTTTCAGAAGCTACAGAGGAACAACAAGCACCGAAAGTTGTTGCTCCCACAGCAGAGCAGATTATTGCTATTAAGGCTGCCATTGTGAATTCACAGACTCTCGAAGAGGTGGCAAGACTTGAAAAgGCACTGAAGTCAGGTCAACTTCCTGCAGATTTGAAAAGCTTGgatgaaaatataatgtcAGATACTGCCAATGAAAAACATGAGGGAATGGTTCTTGATGATAGAAGTCAGGCTCGTGGTGAATCTAATGATACGAATGAGCAGGGCAACACTGAATCTGCTCCCATGGAACAGGAGTA 860 0.4035 MVRLTADLIWKSPHFFNAIKERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLENLPYLNRLGTLLVNNNRITRINPNIGEFLPKLHTLVLTNNRLVNLVEIDPLASLPKLQFLSLLDNNITKKPNYRLYVISKLKHLRVLDFKKVKNKERLEAKNMFASKEAEEVQRTPAKTFSPVETPIVSEATEEQQAPKVVAPTAEQIIAIKAAIVNSQTLEEVARLEKALKSGQLPADLKSLDENIMSDTANEKHEGMVLDDRSQARGESNDTNEQGNTESAPMEQE 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00117 286 Gene3D Ribonuclease Inhibitor 1 175 IPR032675 -
Bva05g00117 286 MobiDBLite consensus disorder prediction 269 286 - -
Bva05g00117 286 Pfam Leucine-rich repeat 1 172 - -
Bva05g00117 286 ProSiteProfiles Leucine-rich repeat profile. 89 110 IPR001611 GO:0005515
Bva05g00117 286 PANTHER U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A 1 242 IPR044640 GO:0000398|GO:0030620
Bva05g00117 286 SUPERFAMILY L domain-like 12 159 - -
Bva05g00117 286 ProSiteProfiles Leucine-rich repeat profile. 43 64 IPR001611 GO:0005515
Bva05g00117 286 PANTHER BNAC08G13840D PROTEIN 1 242 - -
Bva05g00117 286 Coils Coil 153 173 - -
Bva05g00117 286 MobiDBLite consensus disorder prediction 245 286 - -
Bva05g00117 286 MobiDBLite consensus disorder prediction 246 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00117 Bva-Chr5 587581 591615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00117 K11092 - gmx:100803110 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00117 05 587581 591615 Bva05g00117 05 587581 591615 ECH