Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00112 ATGCGTTTTAGCCTACAGATTCTTGCCACAAATGTGAATTGTAAAGGCTTTCAGTTGGATGGTGACTCGGCCTCTGCCAGTTTTGTTTTCCGGGGCTCTTGTATCTGTTTTTGCCTTAAGagGTTTTGTCTTGGGGGTAGACTTATATTTGGTCCTGATGCAAGGTCTCTGTTCCTTACGACCTTCCTGATTGTGGCTCCAGTGATCCTTTTTTGTGCCTTCGTTTCTCATAGGCTAATTAACGAGTTGCCTCACCAATTAGGCAATGCTATCGTAGCTATTAGCACTGTTTTCACAGTTTATgttattcttcttctcttgatTACATCTGGAATAGATCCTGCCATTGTTCCCCGCCATTCATGTCCTCTAGAACTAGATGATGAAGTGTCTTCTATATCTGCTTTGTGGGAAGGAAGTCAGATTGATGGTTCAAGGTTACCTctcataaaagattttattgttaatgGCGTGGTAATTAAAGTCAAGTACTGCCAGACATGCATGCTGTATCGGCCACCCCGGTGTTCTCACTGTTCAATATGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCATGGGTGGGTCAATGTATTGGGAAGAGAAATTACAGAttctttttcatgtttgtGTCCTCCACAACAATGCTGTCCCTATATGTGTTTACTTTCGGCTGGGTGGGCATCCGGAAGATAATGGACGGTCACCATTGCGGTCTCTGGAGGGCTTTCCGGAAGTCTCCTGTTTCAGGATTTCTAATTGTATTTACTTTCATAGCTGCTTGGTTTGTTGGGGGTCTGACGGCATTTCACCTTTGCTTAATTTTCTCTAATCAGGTTCCTGTCACCTATCTATTTTACTGTGGTATTCATATTTTGTCCCCCCTTTTCTA 896 0.4062 MRFSLQILATNVNCKGFQLDGDSASASFVFRGSCICFCLKRFCLGGRLIFGPDARSLFLTTFLIVAPVILFCAFVSHRLINELPHQLGNAIVAISTVFTVYVILLLLITSGIDPAIVPRHSCPLELDDEVSSISALWEGSQIDGSRLPLIKDFIVNGVVIKVKYCQTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGKRNYRFFFMFVSSTTMLSLYVFTFGWVGIRKIMDGHHCGLWRAFRKSPVSGFLIVFTFIAAWFVGGLTAFHLCLIFSNQVPVTYLFYCGIHILSPLF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00112 298 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 38 281 - -
Bva05g00112 298 Pfam DHHC palmitoyltransferase 163 280 IPR001594 GO:0016409
Bva05g00112 298 ProSiteProfiles DHHC domain profile. 163 213 - -
Bva05g00112 298 PANTHER S-ACYLTRANSFERASE 38 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00112 Bva-Chr5 563682 566766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00112 113 206 Lipid Metabolism Gene Families AT4G22750 41.053 1.22e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00112 - - qsu:112039743 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00112 05 563682 566766 Bva05g00112 05 563682 566766 ECH