Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00107 ATGGCTTCCGTTTCCAAACTCTTGACTCCAAATCCGGCTGCATCCTTATCGTTTGGTTCCAGATCTTCTCAGTCGCAGCCAAGGTGTTTGATCGGTTTCAAAACTTCCACCAATTTCCCAAACAACCTTTCTTCTTCCCTGCGAAGCCACCAACGTCACTCTCACTCTCCAAGCGGACCTTTTCTGATCAGATGCTCTCAAACTGGTGGAAACGAAAGTCCTGCCAACAGGACCACTCTTCATGATCTCTATGAAAAGGAAGGGCAGAGTCCATGGTATGATAACCTCTGCCGACCTGTTACAGATCTGATTCCTTTGATAGAGAGTGGAGTGAGAGGTGTAACTAGCAATCCTGCGatttttcaaaaagcaaTTTCATCATCAAATGCTTACAACGACCAGTTCAGGGAACTTGTACAAGCTGGAAAAGACATTGAAAGTGCATACTGGGAACTTGTAGTGAAGGACATCCAAGATGCGTGCAAGCTATTTGAGCCAATCTATGATCAAACGGATGGTGGTGATGGCTATGTGTCTGTTGAAGTATCTCCCAGACTTGCTGATGACACTGAAGGGACAATAGAGGCGGCAAAATGGCTTCATAATGTGGTCAATCGCCCTAATGTTTACATAAAGATTCCCGCTACAGCTCCATGTATCCCTTCAATTAAGGAAGTTATCGCACATGGAATAAGTGTGAATGTTACGCTTATATTCTCTCTCGCAAGATACGAAGCTGTAATTGATGCTTATTTGGATGGTCTTGAGGCTTCTGGGCTAAGTGACCTCTCTAGAGTCACAAGTGttgcctctttctttgtcaGTCGAGTTGACACTCTCGTTGACAAGTTGCTTGAGAAGATTGGAACTCCAGAGGCCCTTGATCTTCGTGGAAAGGCTGCAGTAGCTCAAGCAGCACTGGCGTACCAGCTCTACCAGAAGAAATTCTCGGGTCCAAGGTGGGAAGCTCTGGTTAAAAAGGGTGCCAAAAAACAGAGACTGCTCTGGGCCTCGACCAGTGTCAAGAATCCTGCATACCCTGACACCTTATATGTTGCTCCTCTGATTGGACCTGACACCGTATCGACCATGCCAGACCAAGCCCTCCAAGCATTTATCGATCATGGTACTGTATCCAGGACAATTGATTCAAATGCATCTGAAGCTGAAGGGGTATACAATGCTATTGAGAAATTGGGAATTGACTGGGGTTTTGTTGGATCCCAGCTTGAAATAGAAGGGGTGGACTCATTCAAGAAGAGCTTTGACAGCCTGCTTGATACCCTGCAAGAGAAGGCAAACTCACTTAGGTTGGTGAGCCTTTG 1325 0.4506 MASVSKLLTPNPAASLSFGSRSSQSQPRCLIGFKTSTNFPNNLSSSLRSHQRHSHSPSGPFLIRCSQTGGNESPANRTTLHDLYEKEGQSPWYDNLCRPVTDLIPLIESGVRGVTSNPAIFQKAISSSNAYNDQFRELVQAGKDIESAYWELVVKDIQDACKLFEPIYDQTDGGDGYVSVEVSPRLADDTEGTIEAAKWLHNVVNRPNVYIKIPATAPCIPSIKEVIAHGISVNVTLIFSLARYEAVIDAYLDGLEASGLSDLSRVTSVASFFVSRVDTLVDKLLEKIGTPEALDLRGKAAVAQAALAYQLYQKKFSGPRWEALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFIDHGTVSRTIDSNASEAEGVYNAIEKLGIDWGFVGSQLEIEGVDSFKKSFDSLLDTLQEKANSLRLVSL 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00107 441 PIRSF Trnald_Bac_Plnt 69 441 IPR004732 GO:0004801|GO:0005737|GO:0006098
Bva05g00107 441 Hamap Transaldolase [tal]. 78 439 IPR004732 GO:0004801|GO:0005737|GO:0006098
Bva05g00107 441 Pfam Transaldolase/Fructose-6-phosphate aldolase 105 428 IPR001585 GO:0005975
Bva05g00107 441 Gene3D Aldolase class I 78 433 IPR013785 -
Bva05g00107 441 PANTHER TRANSALDOLASE 1 440 IPR001585 GO:0005975
Bva05g00107 441 CDD Transaldolase_like 90 424 IPR004732 GO:0004801|GO:0005737|GO:0006098
Bva05g00107 441 ProSitePatterns Transaldolase signature 1. 113 121 IPR018225 GO:0005975
Bva05g00107 441 SUPERFAMILY Aldolase 80 432 - -
Bva05g00107 441 TIGRFAM tal_mycobact: transaldolase 90 427 IPR004732 GO:0004801|GO:0005737|GO:0006098
Bva05g00107 441 PANTHER BNAA08G02750D PROTEIN 1 440 - -
Bva05g00107 441 MobiDBLite consensus disorder prediction 42 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00107 Bva-Chr5 538536 542101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00107 K00616 - pop:7482826 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00107 05 538536 542101 Bva05g00107 05 538536 542101 ECH