Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00105 ATGCGTTTACTCAGTGCTGTAAATGCCTCCTCACGGTCATGGTCATCAAGTTGGAGTCGTCTTGCTCATCAATTCTTGGTTAGCCTCAGTCGCAACCCCTGCCGCTACTGGTCACACTTGTCAGCTCAATCCTTGTCAATGGACGCCGTTGAAGAATCACTTCGCAAAGCCCTGATTGAAAAGCAGAGTGCCGTGGAAGCACAAGGAAATGCGGTGCGTGCTCTTAAAGCAGCCTCTGCATCCAAGTCTGAAATTGACGATGCCGTTGAAACCCTCAATGCCTTGAAGCTCGAAAAGACTTCCGTTGAGAGAAAGCTCCAAGCCTGCTTAAGTAACGCCGGCGGTGAGAACTTCACCAATAAGGAATCATTCCGTCAAGCCGTCGTTAACACTCTTGAACGGCGTCTGTTTTATATTCCCTCCTTCAAGATTTACGGGGGCGTTGCTGGCCTCTACGATTATGGACCACCAGGTTGCGCTGTTAAATCCAATGTCCTATCTTTTTGGCGTCAGCATTTTGTTCTGGAGGAGAACATGCTGGAGGTTGACTGCCCGTGTGTCACACCTGAAGTTGTTCTGAAGGCATCAGGTCATGTGGATAAATTCACTGACCTCATGGTTAAGGATGAGAAAACTGGGACATGTTACCGAGCTGATCATCTGCTCAAGGACTTTTGCAGTGAAAAGCTTCAGAAAGACCTGAGCATTACACCAGACAAAGCTGCAGAACTTAAGCTTGTAttagccaacttggatgatctctCAGCTGAACAGTTGGGTGCAAAAATCAAGGAGTATGGAATCACAGCTCCAGACTCAAGAAATCCACTGTCTGATCCTTATCCATTCAATTTAATGTTCCAAACATCTATAGGTCCATCTGGCTTGAGCCCAGGGTATATGCGTCCTGAAACTGCACAAGGCATATTCGTGAATTTCAAAGACTTGTACTATTACAATGGGAATAAACTCCCTTTTGCAGCAGCCCAAATTGGGCAAGCATTTAGAAATGAGATATCTCCTCGCCAAGGCCTTCTCAGAGTTCGTGAATTCACGCTGGCAGAAATTGAGCACTTTGTTGATCCTGTAGAAAAATCTCATCCAAAATACTCAGAAGTTGCTAACTTAGAGTTTTTGATGTTACCAAGGGAGGAACAAATGTCTGGCCAATCTGCGAAGAGAATGCTTCTTGGTGAAGCTGTTTCCAAGGGAATTGTTAACAATGAGACTCTTGGTTACTTCATCGGTAGAGTATATCTTTTCTTGACACGTCTTGCTATTGATAAAGACCGCTTAAGATTTAGGCAACACCTTGCCAATGAGATGGCCCATTATGCCGCTGACTGTTGGGATGCTGAGATTGAGTGTTCCTATGGTTGGATCGAGAGTGTTGGTATTGCAGATAGATCGGCATATGATCTCCGTGCTCACGCGGAAAAGAGCGGTGTTGGTCTTGTGGCccatgaaaaattttcagaaccTAAAGAAGTGGAGAAATTGGTTATCGCTCCAGTGAAGAAAGAGTTGGGTCTGGCATTCAAGGGGAATCAGAAGATGGTGGTTGAAGCACTTGAGaaaatgagtgaaaaagaagctTTGGATATGAGGGCTACTCTAGAGTCAAAAGGGAGTATGGAGTTTTATGTCTGTACCCTTGGGAAAAATGTGGATATAAAACGGAATATGGTGACcatttacaaggaaaaaaagaaagagcacCAGAGAGTTTTTACACCATCTGTTATTGAACCATCCTTTGGCATTGGGCGAATAATTTATTGCCTTTTTGAGCATTCTTTCTACACGAGGCCAAGTAAAGCTGGGgatgaacaattaaatgtatTTCGCTTTCCCCCTCTCGTGGCTCCTATTAAATGCACAGTTTTTCCTCTAGTTCAGAATCAAGAGTATGAGGAGGTTGCTAAAATCATTTCCAAGTCATTGACTGCAGTCGGAATCTCGCATAAGATTGACATGACAGGTACATCAATAGGGAAGCGGTATGCAAGGACAGATGAACTTGGTGTTCCCTTTGCTGTCACTGTAGATTCAACATCCTCGGTGACTATTCGGGAAAGGGACAGCAAGGATCAAGTGCGTGTTGGTGTAGAAGAGGCAGCATCAATTGTCAAGGAGGTAACTGAAGGCCAGAGGACATGGGCACATGTGTGGGCAACGCTTCCTCATCATTCCTCCGCAACTGTGGATGATTG 2213 0.4315 MRLLSAVNASSRSWSSSWSRLAHQFLVSLSRNPCRYWSHLSAQSLSMDAVEESLRKALIEKQSAVEAQGNAVRALKAASASKSEIDDAVETLNALKLEKTSVERKLQACLSNAGGENFTNKESFRQAVVNTLERRLFYIPSFKIYGGVAGLYDYGPPGCAVKSNVLSFWRQHFVLEENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCSEKLQKDLSITPDKAAELKLVLANLDDLSAEQLGAKIKEYGITAPDSRNPLSDPYPFNLMFQTSIGPSGLSPGYMRPETAQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPVEKSHPKYSEVANLEFLMLPREEQMSGQSAKRMLLGEAVSKGIVNNETLGYFIGRVYLFLTRLAIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIESVGIADRSAYDLRAHAEKSGVGLVAHEKFSEPKEVEKLVIAPVKKELGLAFKGNQKMVVEALEKMSEKEALDMRATLESKGSMEFYVCTLGKNVDIKRNMVTIYKEKKKEHQRVFTPSVIEPSFGIGRIIYCLFEHSFYTRPSKAGDEQLNVFRFPPLVAPIKCTVFPLVQNQEYEEVAKIISKSLTAVGISHKIDMTGTSIGKRYARTDELGVPFAVTVDSTSSVTIRERDSKDQVRVGVEEAASIVKEVTEGQRTWAHVWATLPHHSSATVDD 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00105 737 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 126 604 IPR006195 -
Bva05g00105 737 Pfam WHEP-TRS domain 63 98 IPR000738 GO:0004812|GO:0005524|GO:0006418
Bva05g00105 737 SUPERFAMILY S15/NS1 RNA-binding domain 63 106 IPR009068 -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 300 317 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 281 293 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 579 591 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 349 359 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 144 158 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 664 683 - -
Bva05g00105 737 PRINTS Glycyl-tRNA synthetase signature 332 349 - -
Bva05g00105 737 Gene3D - 623 734 IPR036621 -
Bva05g00105 737 Gene3D - 502 570 - -
Bva05g00105 737 Gene3D Bira Bifunctional Protein; Domain 2 130 491 IPR045864 -
Bva05g00105 737 Pfam Anticodon binding domain 625 712 IPR004154 -
Bva05g00105 737 TIGRFAM glyS_dimeric: glycine--tRNA ligase 126 712 IPR002315 GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426
Bva05g00105 737 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 300 598 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva05g00105 737 PANTHER GLYCINE--TRNA LIGASE 1, MITOCHONDRIAL 41 736 - -
Bva05g00105 737 SUPERFAMILY Class II aaRS and biotin synthetases 125 628 IPR045864 -
Bva05g00105 737 CDD GlyRS_anticodon 595 715 - -
Bva05g00105 737 Coils Coil 78 105 - -
Bva05g00105 737 CDD GlyRS-like_core 128 474 IPR033731 -
Bva05g00105 737 SMART WHEP_TRS_a_2_a_3_a 61 115 IPR000738 GO:0004812|GO:0005524|GO:0006418
Bva05g00105 737 Gene3D - 201 285 - -
Bva05g00105 737 Gene3D - 62 105 - -
Bva05g00105 737 SUPERFAMILY Class II aaRS ABD-related 613 729 - -
Bva05g00105 737 PANTHER GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 41 736 IPR027031 -
Bva05g00105 737 ProSiteProfiles WHEP-TRS domain profile. 57 113 IPR000738 GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00105 Bva-Chr5 528714 533616 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00105 K01880 - csv:101213236 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00105 05 528714 533616 Bva05g00105 05 528714 533616 ECH