Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva05g00093 | ATGGCAGCTGAGTTGCAGCCGCCGGAAGCTCCAATTACTTCAGCACCAAGCACCGCCAATACAGCAACCGAAACGGCAGCGGCGATACCAGTAACAACGGCAACAACTGCGCCAACGCCCCCATCAGTAACGGCGGCCCATCCCCACTCTGAGAACGCAGGCCCAACTTTAGCTCCAAAACGCCAACGACGTCCCAGCGTTCGATTGGGTGAGATCGGCGATCAACCCGCCACACTCTCCTACGACTCCCATGCGCGCCGACCCACCAAGCATCCATGGAGGCTCCCGAAAGACTCTTCTTCTGCTCCCTCATCTAAAGCTATCAAAGCTCGCTCTTTAATTAATCTCGTAAACGGTGGTGGCGATTCCCATGTTAATCAAGAGGTCGAGGAGAGGAATAATCAAAATGGAGACGGGAATCCCGAGTTTGGGTTTCGGAAGACCAAATCGAAGCGGGGGACTACGACAAAGCGGTTAAGATCCAATTGGGTATCCAGAGTCGATGATGAAGCCGAAGGGTACAGCAGAGAAGACGGAGACGAAGGGTTCCGAGATTTTGATCCCGACTCTGACAGTCTGCTAAAAGACCAGAGCCCAGTGCACTCCGTCGATGATGTCCAGCTCGATTTGTGGCACGGGCAAAGAAGACCAATTGCTCGGCATAGAGTCGCTGAGACACGGGAAAACGATGGTATTGAATTGGATAATTTGCCGGAATCGGATTCTAAGGATCGGAAGTTCGGGAACAGCGAGGGAGTGAGATCGTGGCTCATCGAATTGGGGCTAAGTAGGTACGCTCCCATGTTTGAGATACATGAAGTAGACGATGAAGTGCTGCCAATGTTAACGTTGGAGGATCTCAAAGATATGGGAATAAATGCGGTCGGTTCCAGGCGGAAATTGTACACTGCAATTCAGAAGCTGCGGAAAGGGTTCCCATG | 941 | 0.5218 | MAAELQPPEAPITSAPSTANTATETAAAIPVTTATTAPTPPSVTAAHPHSENAGPTLAPKRQRRPSVRLGEIGDQPATLSYDSHARRPTKHPWRLPKDSSSAPSSKAIKARSLINLVNGGGDSHVNQEVEERNNQNGDGNPEFGFRKTKSKRGTTTKRLRSNWVSRVDDEAEGYSREDGDEGFRDFDPDSDSLLKDQSPVHSVDDVQLDLWHGQRRPIARHRVAETRENDGIELDNLPESDSKDRKFGNSEGVRSWLIELGLSRYAPMFEIHEVDDEVLPMLTLEDLKDMGINAVGSRRKLYTAIQKLRKGFP | 313 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva05g00093 | 313 | Gene3D | - | 247 | 308 | IPR013761 | - | |
| Bva05g00093 | 313 | MobiDBLite | consensus disorder prediction | 11 | 46 | - | - | |
| Bva05g00093 | 313 | MobiDBLite | consensus disorder prediction | 162 | 194 | - | - | |
| Bva05g00093 | 313 | CDD | SAM_superfamily | 253 | 307 | - | - | |
| Bva05g00093 | 313 | PANTHER | PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE | 1 | 313 | - | - | |
| Bva05g00093 | 313 | Pfam | SAM domain (Sterile alpha motif) | 249 | 309 | IPR001660 | GO:0005515 | |
| Bva05g00093 | 313 | PANTHER | SCP160 | 1 | 313 | - | - | |
| Bva05g00093 | 313 | MobiDBLite | consensus disorder prediction | 1 | 198 | - | - | |
| Bva05g00093 | 313 | ProSiteProfiles | SAM domain profile. | 248 | 311 | IPR001660 | GO:0005515 | |
| Bva05g00093 | 313 | SUPERFAMILY | SAM/Pointed domain | 250 | 310 | IPR013761 | - | |
| Bva05g00093 | 313 | SMART | SAM_4 | 245 | 311 | IPR001660 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva05g00093 | Bva-Chr5 | 468412 | 471359 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva05g00093 | - | - | jre:109001211 | 373.244 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva05g00093 | 05 | 468412 | 471359 | Bva05g00093 | 05 | 468412 | 471359 | ECH |