Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00084 ATGTGGGGTCTCATAAGACGACAAGTGTCTGCTGGAGGGGTTCCTCTCACGAGGATTCTTCCTGTCATATCTGCATTGAGAAGTTACTCTTCGTCGGCGAAAGAGATGACAGTGAGAGAGGCTCTTAACTCAGCACTTGATGAGGAAATGTCAGCTGATCCAAAAGTCTTCCTGATGGGCGAAGAGGTTGGTGAATATCAGGGTGCATACAAGATAACTAAGGGACTTTTGGAGAAGTACGGCCCTGAGAGGGTTCTCGATACTCCAATCACCGAGGCTGGCTTTACGGGTATTGGAGTAGGCGCTGCTTACTATGGTCTAAGGCCTGTTGTGGAGTTTATGACATTTAACTTCTCTATGCAGGCAATAGACCACATCATTAATTCTGCTGCAAAATCAAACTACATGTCTGCTGGGCAAATTTCTGTACCTATTGTCTTTAGAGGCCCCAACGGTGCTGCTGCTGGGGTTGGTGCTCAGCATTCTCAATGTTATGCTGCTTGGTATGGTTCCTGCCCTGGGTTGAAAGTGTTAGCACCATATTCTTCTGAAGATGCTCGTGGTCTGCTGAAAGCTGCTATAAGAGACCCTGATCCTGTTGTTTTCCTTGAAAACGAGTTGCTATATGGTGAGTCATTCCCTGTTTCAGCAGAAGTTCTTGATTCAAGTTTTTGCCTTCCTATAGGGAAAGCCAAGatagagagagaaggaaaggaTGTGACTATTACAGCCTTTTCAAAAATGGTTGGCCACGCTCTCAAGGCTGCTGAGATACTGGCAAAGGAAGGAATCAGTGCTGAGGTTATAAACTTGCGATCAATCCGGCCACTTGATAGATCCACTATCAATACTTCTGTCAGGAAAACCAATAGACTGGTAACAGTTGAAGAAGGGTTTCCTCAGCACGGTGTTGGCGCTGAAATATGCACATCCGTTATTGAGGAGAGCTTTGGTTATCTTGATGCACCAGTTGAGAGAATTGCAGGGGCTGATGTTCCCATGCCTTACGCATCCAACCTGGAGAGAATGGCTGTCCCACAGGTTGAAGATATTGTTCGTGCTGCAAAGAGAGCGTGCTACAGATCTGTGCCAATGGCTGCGGCTGCTTG 1109 0.459 MWGLIRRQVSAGGVPLTRILPVISALRSYSSSAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKITKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLRPVVEFMTFNFSMQAIDHIINSAAKSNYMSAGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYGSCPGLKVLAPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKMVGHALKAAEILAKEGISAEVINLRSIRPLDRSTINTSVRKTNRLVTVEEGFPQHGVGAEICTSVIEESFGYLDAPVERIAGADVPMPYASNLERMAVPQVEDIVRAAKRACYRSVPMAAAA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00084 369 Gene3D - 35 227 - -
Bva05g00084 369 PANTHER DEHYDROGENASE RELATED 20 364 IPR027110 GO:0004739|GO:0006086
Bva05g00084 369 CDD TPP_PYR_E1-PDHc-beta_like 40 206 - -
Bva05g00084 369 Gene3D - 228 360 IPR009014 GO:0003824
Bva05g00084 369 SUPERFAMILY TK C-terminal domain-like 226 358 IPR009014 GO:0003824
Bva05g00084 369 Pfam Transketolase, C-terminal domain 229 351 IPR033248 -
Bva05g00084 369 SMART Transket_pyr_3 36 211 IPR005475 -
Bva05g00084 369 Pfam Transketolase, pyrimidine binding domain 35 210 IPR005475 -
Bva05g00084 369 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 34 239 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00084 Bva-Chr5 421066 425812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00084 30 359 Acyl Lipid Metabolism Gene Families AT1G30120 42.424 1.91e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00084 K00162 - cit:102608638 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00084 05 421066 425812 Bva05g00084 05 421066 425812 ECH