Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00057 ATGATATGTGCCTGTCATCGCCAACGTGGAAatcagaaagagagagaatgggGTAGGGGCGTTGGGTCGGACGAGGGATTAATTTCTTACACACAAGGGAAATCGGGTTGGGGCATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGGAGCTCTTGGACCTCTAcgattcttcttcttcttcttcttcttctcattCTTCAATTCTTCTACCTTCTCATCAACAACACTTTCGCCAACATCCCAGATGGTGCTTCCTcgattttgatgataaatctGTTGATGAATGCTGTGGCCTTGTAATGGCAGCTGGAAAGTCTGGAAGTTTCAGGATGTTGGAGCCCCTAAAGCCTCCACCCACTAAGAAGTCTCGAAGAGATCGGAGCAGGGGTAAATCATCTGAAGTACCCTGTACAACTGAGGTTATGGAACAAGAAATTTGGAAGGATTTTCCTGCAGATCTATTTGAAGCTGTCATTGCACGACTTCCTATTGCAACATTTTTCCGTTTTCGCTCTGTCTGTCGGGGATGGAATTCCTTGCTTACTTCCCAAAGTTTTTCTCAGCATTGTGCTGAAGTCCCACAAGTAAATCCCTGGTTTTACACCATTACTCATGAAAATCTGAATTCAGGAGCCATGTATGACCCTTCTTCGAAAAAATGGCATCACCCCACCGTATCAACACTTGCCACAAAGTCGATTGTTTTACCAGTGGCTTCAGCTGGGGGTCTAGTTTGCTTTCTTGACATCGGTCATCGAAATTTCTACGTTTGTAACCCACTGACTCAATCTTTCAAGGAGTTGCCAGCTAGGTCAGTTAAGGTCTGGTCTCGTATTGCTGTAGGGATGACCCTAAATGGGAACGCAACTGGTGCAGGCTACAAGATCCTGTGGGTGGGTTGTGATGGAGAGTATGAAGTTTATGACTCGGTAAAGAACTCTTGGACTTGTCCAGGAAACATGCCTGTGAGTGTTAAGCTGCCACTATCACTGAACTTCAAGTCACAGGCAGTTTCAATTGATACCACACTTTACTTCATGCGATCAGATCCAGAAGGGATTATCTCCTATGATATGGTAACTGGGGTTTGGAAACAGTACATAATTCCTGCGCCAGTCCATCTCACTGACCACACATTGGCTGAGTGTGATGGCCGGATCATGCTTGTGGGGCTGCTAACTAAGAATGCCGCCACATGTGTGTGCATATGGGAGCTGCAGAAAATGACGCTCTTGTGGAAGGAGGTTGACAGAATGCCAAACATATGGTGCTTGGACTTTTATGGTAAGCACGTGAGAATGACTTGCCTGGGAAATAAAGGCTTGCTCATGTTCTCCTTGAGATCAAGACAAATGAATCGCTTGGTTACTTACAACATAGCAAGCAGGGAATGGCTCAAGGTTCCTGGGTGTGCGGTGCCACGAGGGAGAAAACGGCAATGGATTGCATGTGGCACTTCGTTTTATCCATGCCTTACTGCAATGGCTTG 1502 0.4461 MICACHRQRGNQKEREWGRGVGSDEGLISYTQGKSGWGMEGLAMLKQLIGQLQELLDLYDSSSSSSSSHSSILLPSHQQHFRQHPRWCFLDFDDKSVDECCGLVMAAGKSGSFRMLEPLKPPPTKKSRRDRSRGKSSEVPCTTEVMEQEIWKDFPADLFEAVIARLPIATFFRFRSVCRGWNSLLTSQSFSQHCAEVPQVNPWFYTITHENLNSGAMYDPSSKKWHHPTVSTLATKSIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRIAVGMTLNGNATGAGYKILWVGCDGEYEVYDSVKNSWTCPGNMPVSVKLPLSLNFKSQAVSIDTTLYFMRSDPEGIISYDMVTGVWKQYIIPAPVHLTDHTLAECDGRIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMFSLRSRQMNRLVTYNIASREWLKVPGCAVPRGRKRQWIACGTSFYPCLTAMA 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00057 500 PANTHER BNAA07G08860D PROTEIN 82 500 - -
Bva05g00057 500 SMART fbox_2 154 194 IPR001810 GO:0005515
Bva05g00057 500 Pfam F-box domain 152 190 IPR001810 GO:0005515
Bva05g00057 500 MobiDBLite consensus disorder prediction 114 139 - -
Bva05g00057 500 PANTHER F-BOX/KELCH-REPEAT PROTEIN 82 500 - -
Bva05g00057 500 SUPERFAMILY Galactose oxidase, central domain 215 481 IPR011043 -
Bva05g00057 500 SUPERFAMILY F-box domain 146 221 IPR036047 GO:0005515
Bva05g00057 500 Gene3D - 151 190 - -
Bva05g00057 500 Gene3D - 204 487 IPR015915 GO:0005515
Bva05g00057 500 MobiDBLite consensus disorder prediction 121 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00057 Bva-Chr5 294852 298364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00057 - - gmx:100810179 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00057 05 294852 298364 Bva05g00057 05 294852 298364 ECH