Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00052 atggcgTGCCGGAGCATGCTTCGTTCCGCGATGTTTGTAGAACCGTTCCGACCGCTTCGTTTCAATAGAGGCTCATACTGCAACCCTAGAACCGTTAGGGCTGCACGATTTCATTTTGCAAAACGAGCTCTTAGTTGCTCTTACAACGAACAACCGTCGTCCTCATCTTCTCAAGACGATCAAGGTCCTCCTCAAGAAGCTGTGCTCAGAGCCATTTCAGAGGTGTCCAAGACAGAAGGGAGGGTTGGCCAAACGACAAATATGGTCATTGGAGGAACTGTCGCAGATGATTCTACCAATGAATGGCTGGCTTTGGATCAGAAGGTAAACTCCTACCCTACTGTTCGAGGGTTTACTGCAATAGGAACTGGAGGTGAGGACTTTGTGCATGCCATGGTCGTTGCTGTCGAGTCTGTAATCCAACAGCCAATTCCTGAGGGACACGTGAGGCAGAAGTTATCATCAAGGGGCAAATATGTATCTGTAAATATTGGACCAGTTCAAGTTGTCTCTAGTGAGCAGgTCCAAGCTGTATATAATGCCATGAGAAGGGACGACaggatgaaatattttttgta 578 0.4567 MACRSMLRSAMFVEPFRPLRFNRGSYCNPRTVRAARFHFAKRALSCSYNEQPSSSSSQDDQGPPQEAVLRAISEVSKTEGRVGQTTNMVIGGTVADDSTNEWLALDQKVNSYPTVRGFTAIGTGGEDFVHAMVVAVESVIQQPIPEGHVRQKLSSRGKYVSVNIGPVQVVSSEQVQAVYNAMRRDDRMKYFL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00052 192 SUPERFAMILY YbeD/HP0495-like 106 192 IPR027471 -
Bva05g00052 192 Pfam Protein of unknown function (DUF493) 109 192 IPR007454 -
Bva05g00052 192 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 1 192 - -
Bva05g00052 192 Gene3D - 106 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00052 Bva-Chr5 263798 267389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00052 - - zju:107428290 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00052 05 263798 267389 Bva05g00052 05 263798 267389 ECH