Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00047 ATGTTTAATATCAGTTACATCAGAGGGCTATTTCCGGAGAAGTATTTCAATGATAAGTCTGTTCCTGCTTTGGGTGTATACGATGCCTTACAGAAGAAATACTTGAAGACACTTCTCTTCTGTGTGTGTGAAGCAGCAGATGGACCGATGATTGAGGAATATGCATttTCGTTTAGCTATGCGGATTCTGACAAGCAAGAAGTTTCTATGAATATTAATCGCAttggaaacaagaaacaacGAGGGACATTCAAATGTAACTCTACCACAGAAATTACTCCCCAACAGATGAGTAGTTCAGGTTGTAAAATGATCCGGACACTAGTTCAGTTGATGAGAACTCTGGATGCCAGAAGTGATTATGAGCCTCCATTCTTCAGGTTCTGCACAGAAGAGGAATCCCATCATCCATGGACTGAGAGTCCTCTCAAAATGGAGGTTGGGAACGTAAACAGCAAGCATTTTGTATCAGCTCTCACGgtAAAGAGTTTCCTTGATCCTTGTGAGATTCAGAATGAGGGACTTCGAGATGATGATATGAGGTTTGGTTCCGATTCCGTACAAAGGGATGGGTATACTGATTCTGACTGTCAGTTTGATCATTTTCAAGGGGATCAATATAGAGTTGCTCCAATAGAGAAACAGCAGGCACAGGAAGATAAAGGCTTGACCGATGAAGACAATACACAGGATCCAGTGGAAGATGAGCAACAATTGGCCCTTGTGAAGGAGTGGGTCAACTCTTGCCACCTTGACAATATTGAGCTTACTGAtgttctttcaaattttccaGATATCTCGCTGATAAAACTGCATCATCAGAAGTCAGAATATGAGTTCACTCCtgtgaaagaagaaattgatgatCCAATAGCTCAGTTCAGTGATAAAGATCTGCAGGTTGAAGACTCCGTGTACGTGAAGGCTCTCTATCACGCTCTTCCGATGAAATATGTGACAATAGCAAAGCTCGAGGGAGAAGTTAGCCAGACTGCAGTACGCAAGATAATCGACAAAATAACTCGGGAAGGTTTTCTTGAACCCACAGGCAAGAGGAGATTAGGAAAACGTGTGATCCACTCTGAATTGAGCGAGAGAAAACTGATTGAAGTCCAGAAAGCTTTGAGCACAGAACATATGGATGTTAATCCCCATGAACTAAATAAGAAGTCCAAACAAATTGTTATCTATGGAAATGTGAGCAACTACAGGGACGCGTCCACATGCCGCGTCCTCCGCTCCATTGGATCAGATTTAACTCGAATGAGAGTGAGATCCGATACAAATCAAACTGATTCCATCAGGAGTGGGCAGACAACGGCAAAGGCTAAAGAGTCTGGGAACACTCCCACAAGCAGGGTCGAGGCAAGTTTTATCAATAAAACTTCCATACATAACCGTGTCCGTGTCCCCCATCTTGCAATGTCCTCCCAAGACAAGCTGTCCAGGAAAACAAGCATGGTCAAGGAGCCTATTCTACAAAATTTAAAGCGCCAGAGACCTTA 1505 0.4159 MFNISYIRGLFPEKYFNDKSVPALGVYDALQKKYLKTLLFCVCEAADGPMIEEYAFSFSYADSDKQEVSMNINRIGNKKQRGTFKCNSTTEITPQQMSSSGCKMIRTLVQLMRTLDARSDYEPPFFRFCTEEESHHPWTESPLKMEVGNVNSKHFVSALTVKSFLDPCEIQNEGLRDDDMRFGSDSVQRDGYTDSDCQFDHFQGDQYRVAPIEKQQAQEDKGLTDEDNTQDPVEDEQQLALVKEWVNSCHLDNIELTDVLSNFPDISLIKLHHQKSEYEFTPVKEEIDDPIAQFSDKDLQVEDSVYVKALYHALPMKYVTIAKLEGEVSQTAVRKIIDKITREGFLEPTGKRRLGKRVIHSELSERKLIEVQKALSTEHMDVNPHELNKKSKQIVIYGNVSNYRDASTCRVLRSIGSDLTRMRVRSDTNQTDSIRSGQTTAKAKESGNTPTSRVEASFINKTSIHNRVRVPHLAMSSQDKLSRKTSMVKEPILQNLKRQRP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00047 501 MobiDBLite consensus disorder prediction 474 501 - -
Bva05g00047 501 Gene3D HORMA domain 1 207 IPR036570 -
Bva05g00047 501 ProSiteProfiles HORMA domain profile. 1 161 IPR003511 -
Bva05g00047 501 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 396 - -
Bva05g00047 501 MobiDBLite consensus disorder prediction 426 453 - -
Bva05g00047 501 Pfam HORMA domain 3 154 IPR003511 -
Bva05g00047 501 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 25 396 - -
Bva05g00047 501 PANTHER MEIOSIS-SPECIFIC PROTEIN ASY1 2 23 - -
Bva05g00047 501 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 2 23 - -
Bva05g00047 501 SUPERFAMILY The spindle assembly checkpoint protein mad2 3 168 IPR036570 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00047 Bva-Chr5 237724 241755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00047 K12778 - gmx:100792473 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00047 05 237724 241755 Bva05g00047 05 237724 241755 ECH