Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00046 atgcaaacaaagaaaaaatcctCTGGTAGACACGCTAGTCAAGAACGTGCAACTTCAAGGGGTTCAAGAGCACAGAGGAAGATCTCTGAAAATGGACGAGTAGAAAGGAAAGTCACTGACTTAATTACATCCTCTGTCAGAAAGAAGCAGCCTATCAGCACTCTTGGGAAGAATAGTGGAGAGTCAgtttcttcaacaaatttGTGTAATGAGTATGACTTGGTGGATCACGAGACTTCCACTGATTGTTTGGTGCATGATGTGCCTGATGGTGGTTCAGTAGATTTTATAGGTTTGAACAAGCAAGCAGCACATCTTGAGTCCGGAACTATATTTTCTCCTGGGTTTCACTTATCCAAAGGTTCTGGAGGAAGAGCCATTGACAGGGTTGATTTTGTCAATATTTTTCAGAGAGGGGAACACAAGGGAATCTCTCAAgatcaaaaaattgaattatgcCCGGAGGATATGATAGATGGTCAAGTCAGTCGGGAATCTTTGGTTGGAATGGAAGTAGACTTAGATAATTCTTCCAACTGTACAAATGCACCAGGCTGTGATGTTCAGATGCTTGCTTTAAGCTCCAAAGATGTGAATCGTTGCAACTCTGATTTTGATGGAAATGGTCTTTCCTTGGAAGTTTCTGCCATTTATCTTGCCATGAAAAACTCAAAGCTGGAATGTACTGATGAGCATGATCAGGATCCAATATCTTCTGATCTATGCCCAGAGGATGATGAATTTGTGGATTTTGATGACTTTGATCCTTACTTATTCATAAAGACCTTACCGGACCTGTCATCAGTTGTTCCAACTTTTAGGCCTTTGTTGCTACCTAGACAGACACGGAGTTGCCCTCCGACTACTCTTGTCCTAGACTTGGATGAAACTCTGGTGCATTCTACCTTAGAGCCTTGTGAGGGCGTAGACTTCACATTTCCTGTTCGTCTTGATCTGCAGGAGCATATTGTCTATGTGCGCTGTCGTCCTCACCTCAGAGATTTCCTAGAGAGAGTTTCTGGCGTTTTTgagattattatatttacagCAAGTCAAAGTATTTACGCCGAGCAGCTTCTAAATGTGCTCGATCCAAAGAGGAAGATATTCCGCCATCGTGTTTTCCGTGAATCTTGTGTTTATGTGGAAGGGAACTACCTCAAAGATTTAACAGTTCTGGGTCGAGATTTGTCACGTGTTATAATAATTGACAACTCTCCGCAGgCATTTGGTTTTCAGGTGGATAATGGAATACCGATTGAGAGTTGGTTTGATGATCGTTCGGACCGAGAATTGCTTTTATTACTTCCATTCTTGGAGAGCTTGGTTGGAGTTGATGATGTCCGGCCACTAATTGCAAAGAAGTTCAACCTTCGTGGGAAAATCGCTGCCGCCGGCCATCCTTCTGTAAATACAAATAGAAGGCATCCCTTAGCTAGTTG 1442 0.4092 MQTKKKSSGRHASQERATSRGSRAQRKISENGRVERKVTDLITSSVRKKQPISTLGKNSGESVSSTNLCNEYDLVDHETSTDCLVHDVPDGGSVDFIGLNKQAAHLESGTIFSPGFHLSKGSGGRAIDRVDFVNIFQRGEHKGISQDQKIELCPEDMIDGQVSRESLVGMEVDLDNSSNCTNAPGCDVQMLALSSKDVNRCNSDFDGNGLSLEVSAIYLAMKNSKLECTDEHDQDPISSDLCPEDDEFVDFDDFDPYLFIKTLPDLSSVVPTFRPLLLPRQTRSCPPTTLVLDLDETLVHSTLEPCEGVDFTFPVRLDLQEHIVYVRCRPHLRDFLERVSGVFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLSRVIIIDNSPQAFGFQVDNGIPIESWFDDRSDRELLLLLPFLESLVGVDDVRPLIAKKFNLRGKIAAAGHPSVNTNRRHPLAS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00046 480 MobiDBLite consensus disorder prediction 1 35 - -
Bva05g00046 480 Pfam NLI interacting factor-like phosphatase 289 449 IPR004274 -
Bva05g00046 480 MobiDBLite consensus disorder prediction 8 35 - -
Bva05g00046 480 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 466 - -
Bva05g00046 480 SUPERFAMILY HAD-like 278 453 IPR036412 -
Bva05g00046 480 SMART forpap2 286 430 IPR004274 -
Bva05g00046 480 Gene3D - 274 457 IPR023214 -
Bva05g00046 480 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 288 451 IPR011948 GO:0016791
Bva05g00046 480 ProSiteProfiles FCP1 homology domain profile. 283 442 IPR004274 -
Bva05g00046 480 CDD HAD_FCP1-like 289 420 - -
Bva05g00046 480 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00046 Bva-Chr5 231983 236307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00046 K17616 K12778 gmx:100798665 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00046 05 231983 236307 Bva05g00046 05 231983 236307 ECH