LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva05g00041	ATGGCTCTCCGCTTTGGTTCCGAGGATGTCTCCGCCTTCAAATTCTTCTTGTTCATGGCGGTCATGTACGGTCTCATGTCGATGCTGACCTACTCTGTTATCCACATGAAGTTTGTTAAACCACTTGAAATTAACGCTCCTCTTGATCGTTTCTCGGAAGCCAGAGCTGTTGAACACGTTCGAATGTTGTCTAAACAGATCGATGGTCGTCAAGAAGGGCGTCCTGGATTGAGAGAAGCTGCTCGATATATTAAGGGTCAGTTGCAAGTATTAAAGGAAGGAGCTAGGCCCAACCTCAgAATTGAGATTGAGGAGACTTCTGTAAGTGGCTCAttcaaaatgttatttttgggCCACAATATAGCTCTGGGATACAGAAATCATACAAACATTGTTATGAGGATATCATCGGTTGAATCAAAGCATACTGATCCATCTGTTTTAGTGAATGGGCATTTTGATAGTCCACTTGGTTCCCCAGGTGCTGCTGATTGTGGTTCGTGTGTTGCTTCAATGCTGGAATTAGCAAGACTAATTGTGGACTCTAATTGGACTCCTGACCGCCctgttattttcctttttaatggTGCAGAGGAACTTTTCATGTTGGGTGCACATGGGTTCATGAAGACACATAAATGGCGTGATACAATTGGAGCTTTTATAAATGTGGAGGCATCTGGTTCTGGAGGGCCTGATCTAGTTTGTCAATCTGGACCTGGTTCTTGGCCTTCATATGTATATGTTAAAGCAGCAGTACACCCTATGGCTCACAGTGCAGCTcagGATGTTTTTCCTGTTATTCCCGGGGATACTGATTACCGAATATTTTCCCAAGACTATGGTCATATTCCTGGCCTTGAcattatctttcttcttggtggttatttttatcatacatCCTATGATACAATAGAAAGACTAATACCTGGGAGCATCCAAGCACGTGGAGACAATTTTTTCAGCATAATCAAGGCTTTTACTAATTCTTCTAAGCTGCAAAACATTTACCAAACCAATTATAGTGAAATTACGGCTAACATGTACAAGGATGAGCGGGctgttttctttgattatcTATCATGGTTTATGATATTCTACTCCAGAAAGGTAGCTTGGATTCTTCACAGTATTCCTATCTTCATCTTCCTTGTTATGCCTTTCTTCTTATCACATAGTAGGTCAGGTTCGTGGACAGCAACTCTGTGTGATTTTATGAAAGGATTGTTGTTCCATGCACTTGGGATTATATTAGCGATTCTCATACCTGTTGCTTTTTCTGTGATGAGATGCAGGTTTTCCTCTCAGACAATGAATTGGTTTGCTCATCCTTACCTGGCTTTCTTGATGTTTATACCTTCCTCGCTTGTTGGTCTTTTAATTCCAAGAATTGCCTGGAGATGGTTTCCTCTGTCTCAAGAGGTTTCTCTTGTCAAGATATCAAAGGAGGCACTATCTGATGAGGCAAGGTTCTGGGGAGCATTTGGGTTCTATGCCATAGCAACTATGGCATATCTTGCAGCTGGGTTGAGTGGAGGTTTCTTGACTTTTTTGACGACGGCTTTCATGCTTCTTGCATGGACATCCTTCTGCATAGCAGTCAAATACTATGGCTACCGGTCACTTTGGTCAACAATGTTTTACATAACACCTCTAGTTCCATGCCTTTTGTACTCTGTTTATTTTGGTGGGTTTCTTGCCCAGTTTCTGATTGAGAAGATGGGCATGATGGGTTCTCTTCCTCCACCATATGGAATGTATGTTCCTGATGTAGTTATGGCAGCAATGGTGGGAATCATAACTGTTTGGTGCGTTGGCCCTATAGTGCCTATTTGTAGTCATTGGTTAGCCAGATCGTCCATCATGCAGTTTTTGCTGCATCTTACTGTGTTTGCTTTGGCGTTGTCATCTCAATTCTTCCCTTACAGCACATTTGCTCCCAAGAGGGTTGTTTTTCAGCATACCTTCCGTACAGAAGGCTCAAATCACATTTTGGAAGCCACTTACGATTTTTCTGTGGTGGATTccaattcttttcattttcttttcaaatatgCACCTCAAGTGGCAAAGGAATTGAACATTACTTGTGATATTTCATTGGAATCAGCATTGGTATCTTTACCCGAAACTTGGATGGCACTTTTTCCAgtatcttttctcttttcaaataGCCTAAAGTTCCCAGCAAAAAGGGATGAAATTAAGAAGCAGTATGAATTCTTTCCCAAACTGTCTATTGAGAAGCCACAATTGAATTCTCAAGAGGGACCGAGGAGAGTTTACCTGGAGCTTTATTTGGGttctTTGGAGGAGATCTGGGTTTCGGTTCTCAACATCACTGGTCCCTTATCCAATTGGTCGTTTGCGGACAACGTGCTCGCAGAAGCTGAAACGATCAACAATGGTCCACCATCATACATATGTCGGCTTAGTGGACCCGGCGATGGGAATTGGACCTTCTGGTTAGagGCTAACAGCACTGAACCATTAAGAGTGGAACTGGCTGTATTAGACCAAAAATTGGTTGGTTCTGCAAAGAGACTCAAGGGCCTTTTCCCGGATTGGGTTGATGTCGTTTCTTATTCTAGTTTTATGTCCACCTATcattttta	2615	0.4027	MALRFGSEDVSAFKFFLFMAVMYGLMSMLTYSVIHMKFVKPLEINAPLDRFSEARAVEHVRMLSKQIDGRQEGRPGLREAARYIKGQLQVLKEGARPNLRIEIEETSVSGSFKMLFLGHNIALGYRNHTNIVMRISSVESKHTDPSVLVNGHFDSPLGSPGAADCGSCVASMLELARLIVDSNWTPDRPVIFLFNGAEELFMLGAHGFMKTHKWRDTIGAFINVEASGSGGPDLVCQSGPGSWPSYVYVKAAVHPMAHSAAQDVFPVIPGDTDYRIFSQDYGHIPGLDIIFLLGGYFYHTSYDTIERLIPGSIQARGDNFFSIIKAFTNSSKLQNIYQTNYSEITANMYKDERAVFFDYLSWFMIFYSRKVAWILHSIPIFIFLVMPFFLSHSRSGSWTATLCDFMKGLLFHALGIILAILIPVAFSVMRCRFSSQTMNWFAHPYLAFLMFIPSSLVGLLIPRIAWRWFPLSQEVSLVKISKEALSDEARFWGAFGFYAIATMAYLAAGLSGGFLTFLTTAFMLLAWTSFCIAVKYYGYRSLWSTMFYITPLVPCLLYSVYFGGFLAQFLIEKMGMMGSLPPPYGMYVPDVVMAAMVGIITVWCVGPIVPICSHWLARSSIMQFLLHLTVFALALSSQFFPYSTFAPKRVVFQHTFRTEGSNHILEATYDFSVVDSNSFHFLFKYAPQVAKELNITCDISLESALVSLPETWMALFPVSFLFSNSLKFPAKRDEIKKQYEFFPKLSIEKPQLNSQEGPRRVYLELYLGSLEEIWVSVLNITGPLSNWSFADNVLAEAETINNGPPSYICRLSGPGDGNWTFWLEANSTEPLRVELAVLDQKLVGSAKRLKGLFPDWVDVVSYSSFMSTYHF	871

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva05g00041	871	CDD	M28_Fxna_like	48	367	-	-
	Bva05g00041	871	PANTHER	METALLOPEPTIDASE M28 FAMILY MEMBER	4	869	IPR045175	GO:0006508\|GO:0008235
	Bva05g00041	871	SUPERFAMILY	Zn-dependent exopeptidases	40	330	-	-
	Bva05g00041	871	Pfam	Peptidase family M28	130	321	IPR007484	-
	Bva05g00041	871	PANTHER	BNAA07G25020D PROTEIN	4	869	-	-
	Bva05g00041	871	Gene3D	Zn peptidases	45	344	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva05g00041	-		-	gmx:100796569	1386.32

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva05g00041	05	203298	210429	Bva05g00041	05	203298	210429	ECH