Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00039 ATGATTGTTCTTGGTCTTCACCCACGTCCCCCATTTAACTCCTTACACCACCTGTCTGCTTCTTCGACTCTGAGTTCCCCTTGGAGTCATCTCTGGCATTTGGTCATCGACCTTTGGCTCCCTCTCTCTCGATCTATTATTATTCGGCAAAGGTTTCATCTGCTAAAGATGGATTGGCAAGGACAAAAGCTAGCAGAGCAGCTCATGCAGATAATGCTGCTGGCTTTTGCTGTTGTTGCATTTGCGGTTGGATACATCATAGGCTCATTTCAAATGATGATCCTCATTTACGCTGGTGGTGTGGTTCTTACCACATTGGTCACGGTCCCCAATTGGCCATTTTTCAACCGTCATCCTCTTAAATGGTTAGATCCAAATGAGGTCGAAAAGCATCCAAAACCTCAAGTATCCGGGAGTTCAAGTTCAAAGAAGAAACCTACTAAGAAGTA 449 0.4477 MIVLGLHPRPPFNSLHHLSASSTLSSPWSHLWHLVIDLWLPLSRSIIIRQRFHLLKMDWQGQKLAEQLMQIMLLAFAVVAFAVGYIIGSFQMMILIYAGGVVLTTLVTVPNWPFFNRHPLKWLDPNEVEKHPKPQVSGSSSSKKKPTKK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00039 149 MobiDBLite consensus disorder prediction 126 149 - -
Bva05g00039 149 Pfam Microsomal signal peptidase 12 kDa subunit (SPC12) 57 126 IPR009542 GO:0005787|GO:0006465|GO:0016021
Bva05g00039 149 PANTHER MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT 56 145 IPR009542 GO:0005787|GO:0006465|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00039 Bva-Chr5 195668 198128 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00039 K12946 - cit:102628157 129.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00039 05 195668 198128 Bva05g00039 05 195668 198128 ECH