Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00036 ATGCCTGGTATTTTTGCTGTTAATAAGAGATTTTCAGAGCCAAATATGTGTTTATCCAATTTGGTTCAGGAGGATTCACTTACTCGTTCAAAGAGCAGTCATCATTTAATTTCTGAGGTTCGTGATAACGATGAAAGCTCCATTCTACCTGGGCTTCCGGATGATGTGGCAAAGTATTGTCTTGCACTCGTGCCTCGTTCAAACTTCCCGTCTATGGGTGGTGTCTCTAAAAAATGGAGGTCGTTTATTAAAAGCAAAGAATTTATTACTGTGCGAAGATTGGCAGGGGTGCTTGAGGAATGGCTTTATATATTAACTTCAGATagtgaaggaaaggaaagccACTGGGAGGTTCTGGATTGTCTGGGTCAAAAGCACCGATCTCTTCCAGCAATGCCTGGTCCCGGAAAGGTTGGGTTCGGGGTGGTGGTTCTTAATGGAAAGCTTCTTGTTATGGCTGGTTATTCTGTAATTGATGGAACTGGCTCTCCCTCGGCCGAGGTTTATCAGTATGATTCTTGCCTCAACAGTTGGAGCAGATTGAAAAGCATGAATGTAGCTCGATATGACTTCGCTTGTGCCGAAGTCAATGGCTTGATTTATGCTGTTGGAGGATATGGGATGGATGGTGAGAGTCTTTCTAGTGCTGAGGTGTATGACCCTGATACTAACAAGTGGACAGTGATAGAGAGTCTTCGTCGCCCAAGATGGGGTTGCTTTGCCTGTGGATTTGAGGGAAAACTGTATGTCATGGGTGGAAGGTCGAGCTTCACAATCGGAAACTCAAAGTGTGTTGATGTTTATAACCCTGAGAGGCACAGCTGGTGCGAGATGAAGAATGGTCGTGTCATGGTCACTGCCCATGCGGTGCTAGGAAAGAAGCTGTTCTGTATGGAGTGGAAGAACCAGAGGAAGTTAGCCATATTCAATCCTAACGACAATTCATGGAAAATGGTACCAGTCCCACTTACAGGTAGCTCGAGTATTGGTTTTCGATTTGGGATTCTGGATGAGAAGCTGTTGCTATTCTCACTAGTGGACGAACCTGGATACCAAACTTTGATTTATGATCCAAATGCAACCCCGGGGTTAGAATGGCAGACTTCGGAGATAAAACCATATGGTTTGTGCTTGTGTAGTGTAACAATCAAGGCGTG 1157 0.4391 MPGIFAVNKRFSEPNMCLSNLVQEDSLTRSKSSHHLISEVRDNDESSILPGLPDDVAKYCLALVPRSNFPSMGGVSKKWRSFIKSKEFITVRRLAGVLEEWLYILTSDSEGKESHWEVLDCLGQKHRSLPAMPGPGKVGFGVVVLNGKLLVMAGYSVIDGTGSPSAEVYQYDSCLNSWSRLKSMNVARYDFACAEVNGLIYAVGGYGMDGESLSSAEVYDPDTNKWTVIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKCVDVYNPERHSWCEMKNGRVMVTAHAVLGKKLFCMEWKNQRKLAIFNPNDNSWKMVPVPLTGSSSIGFRFGILDEKLLLFSLVDEPGYQTLIYDPNATPGLEWQTSEIKPYGLCLCSVTIKA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00036 385 Gene3D - 87 381 IPR015915 GO:0005515
Bva05g00036 385 PANTHER OS02G0202900 PROTEIN 1 385 IPR045887 -
Bva05g00036 385 SMART kelc_smart 247 292 IPR006652 GO:0005515
Bva05g00036 385 SMART kelc_smart 148 198 IPR006652 GO:0005515
Bva05g00036 385 SMART kelc_smart 199 246 IPR006652 GO:0005515
Bva05g00036 385 Pfam F-box domain 51 88 IPR001810 GO:0005515
Bva05g00036 385 SUPERFAMILY Kelch motif 99 351 IPR015915 GO:0005515
Bva05g00036 385 Pfam Kelch motif 138 185 IPR006652 GO:0005515
Bva05g00036 385 Pfam Kelch motif 187 232 IPR006652 GO:0005515
Bva05g00036 385 Pfam Kelch motif 239 280 IPR006652 GO:0005515
Bva05g00036 385 SUPERFAMILY F-box domain 40 90 IPR036047 GO:0005515
Bva05g00036 385 PANTHER KELCH REPEAT F-BOX PROTEIN 1 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00036 Bva-Chr5 185967 190510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00036 52 230 Miscellaneous Gene Families AT4G33900 30.964 1.05e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00036 - - vvi:100267636 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00036 05 185967 190510 Bva05g00036 05 185967 190510 ECH