Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00026 ATGGCCACAAGAACAGTCGCTAAAGATATCATCACTCTTCGCGGTTCTGCAGCAATAGTCAGCGAGTTCTTTGGCTATGCTGCCAACAGTATTCTTTACAATCGTGGAGTTTATCCAGAAGAAAGCTTTCAGAAAGTCAAAAAATACGGTCTCCCAATGCTGCTTACTCAAGATGAGGGCGTCAAATCTTTTCTTGCAAACCTAAGTGCTCAACTCTCGGAATGGCTAGAAGCTGGGAAATTGCAGAGGGTTGTGCTTGTTATAATGAGCAAGGCCACCAATGAAGTCCTAGAGAGGTGGAACTTCAGCATTGAGACTGACAGTGAGGTTGTTGAGAAGAGTGTCTCGAGGGAGAAGAGTGACAAGGAAATCATGAGGGAGATACAAGCAATTATGCGACAGATTGCTTCAAGCATCACCTATTTGCCATGCCTGGATGAAACTTGCGTTTTTGATGTGTTGGCATACACTGACAAAGATGTGGCTGTTCCGTTCACTTGGATTGAGAGTGATCCCAAGCTGATAGCAAATCCCCAAATGGTGAAATTGCATTCTTTTGATACCAAGATTCACAAGGTTGACACTCTTGTTTCGTACAAGAACGACGAATGGGATGAACAGTA 623 0.4382 MATRTVAKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFQKVKKYGLPMLLTQDEGVKSFLANLSAQLSEWLEAGKLQRVVLVIMSKATNEVLERWNFSIETDSEVVEKSVSREKSDKEIMREIQAIMRQIASSITYLPCLDETCVFDVLAYTDKDVAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDEQ 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00026 207 SUPERFAMILY The spindle assembly checkpoint protein mad2 10 203 IPR036570 -
Bva05g00026 207 ProSiteProfiles HORMA domain profile. 14 197 IPR003511 -
Bva05g00026 207 Gene3D HORMA domain 1 203 IPR036570 -
Bva05g00026 207 Pfam HORMA domain 16 191 IPR003511 -
Bva05g00026 207 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 1 205 IPR045091 -
Bva05g00026 207 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2A 1 205 IPR027097 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00026 Bva-Chr5 126691 128491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00026 K02537 - rcu:8278426 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00026 05 126691 128491 Bva05g00026 05 126691 128491 ECH