Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00024 ATGGCTCCGAAGCCGAAGGACAAACCAAAAGCCGCCTCGTTGCCGCAACAGCCTCCACCTCCCATCGAAGATCTCTTTACTACGCTCAACAGGCACATACAGCGTTCCGAATTCGAGCATGCTGTTAAAGTTGCAGATCAAATCCTCTCAATTTCACCTGGCGATGAGGATGCGCTTCGCTGCAAGGTCGTGGCACTGATCAAAGCTGATAGCATCGACGATGCACTATCAACGATTCAAGCTTCTCAGAGGCCGCCGGctgatttcaatttcttcaaaGCATACTGCTTATACAGACAAAACAAGTTAGATGAAGCTTTGGAGTCTTTGAAAAGCCAAGAGAAAAGATCTGCAACCATGCTGCTGGAATCTCAGATTTTGTATCGTCTAGGGAAAATGGATGCTTGTATGGATATTTACCAGAAGCTCCCAAAATCTGAGATTGAATCCTTAGAAATAAATTCTGTTGCTGGCCTAATTATGGCTGAGAGGGCATATGAAGTGCAAGGGATGATGGAGTCATTTAGGGTAAAAGCAACTAGCAGCTTTGAGTTAGCATACAACGTTGCTTGTTCTTTAATTGAAAGGAAGAACTACACAGATGCTGAACAACTCTTGCTGTCAGCCCGCAGAATTGGTCAAGAAACCCTCATGGAAGATAACTTGCCTGATGATGAGATAGAACTTGAGTTGTCTCCCATAGCTGTACAATTAGCCTATGTCCAGCAGCTTCTTGGGCGTACAAAAGATGCTACTGAAGCTTACATGGACATAATTAAACGAGATCTGGCAGATGAATCATCAATTGCAGTGGCGGTGAACAATCTTGTTGCATTGAGAGGTCCAAAAGAGGTTTCTGATAGCCTAAGGAAACTTGATCGGCTTAAAGAGAAAGACGCAAATAGCTTTCAGCTTGCTCATGGACTGGATGCAAAACTTTCAGCAAAACAAAGGGAATCAATATATGCAAATCGTGTCCTTTTACTTCTGCATGCCAATAGGATAGATCAGGCCCGAGAAATTGTTTATGCTCTGCCGGACATGTTTCCTGACAGTGTGATGCCAGTACTACTGCAAGCTGCAGTGCTGATGAGAGAGAACAAAGCTGGAAAGGCTGAGGAAGTACTAGCGCAGTTTGCTGACAAGTCCCCTGAAAAGTCCACTGTTCTTTACTTAGCCAGAGCTCAGGTGGCTGCTGCTGCAGGCCACCTTCATATTGCAGCAGATTCTCTGGCTAAGATATCGGATATCCAGCACAGGCCTGGCACTGTTGCGACACTGGTGTCTCTAAAAGAGCGTGCCGGTGACATTGACGGTGCAGCTGCTGTGCTCGATTCTGCAATCAAATGGTGGTCTAATGCCATGACCGAGGACAACAAGCTTAATGTCATAATGCAAGAGGCCGCTTCCTTCAAGCTCAGGCATGGCAGAGAAGGGGATGCTGCGCGTCTATATGAGGAGCTTGTGAAAAGCCAAGGAAGTGTAGAAGCGTTAGTTGGGCTGGTAACGACAGTCGCCCGCGTGGATGTTGATAAGGCAGAACTATATGAAAAACAACTGAAGCCATTACCTGGTTTGAAGGGGATTGATGTGGACAGTTTGGAGCGGACTTCTGGTGTCAAACATGTTGAGGCTTCTTCTTATGTTGGTGTCACTGAAACATATGAGGAAGGGAAGAATAAGACAAAagccaagaaaaagagaaagagaagaccGAGGTACCCTAAAGGGTTTGACCCAGCAAACCCAGGTCCATCCCCGGATCCTGAGAGGTGGCTTCCCAGGCGGGAGAGATCGAGTTACAGGCCCAAGAGAAAGGACAAAAGAGCTGCCCAAGTGAGAGGTTCTCAGGGTGCGGTAGTTAGAGAAAAACACGATCCGGGTGCTACTTCAAACAAAGCAAACCAGGTTGGGGTTGCCACCAAAGGAGTTATGCAGAATGCAGTTGCTGAGCAAACCAAGCCTTCATCAAAGTCAAGGAAGAAATCCAGGAATTA 1997 0.4562 MAPKPKDKPKAASLPQQPPPPIEDLFTTLNRHIQRSEFEHAVKVADQILSISPGDEDALRCKVVALIKADSIDDALSTIQASQRPPADFNFFKAYCLYRQNKLDEALESLKSQEKRSATMLLESQILYRLGKMDACMDIYQKLPKSEIESLEINSVAGLIMAERAYEVQGMMESFRVKATSSFELAYNVACSLIERKNYTDAEQLLLSARRIGQETLMEDNLPDDEIELELSPIAVQLAYVQQLLGRTKDATEAYMDIIKRDLADESSIAVAVNNLVALRGPKEVSDSLRKLDRLKEKDANSFQLAHGLDAKLSAKQRESIYANRVLLLLHANRIDQAREIVYALPDMFPDSVMPVLLQAAVLMRENKAGKAEEVLAQFADKSPEKSTVLYLARAQVAAAAGHLHIAADSLAKISDIQHRPGTVATLVSLKERAGDIDGAAAVLDSAIKWWSNAMTEDNKLNVIMQEAASFKLRHGREGDAARLYEELVKSQGSVEALVGLVTTVARVDVDKAELYEKQLKPLPGLKGIDVDSLERTSGVKHVEASSYVGVTETYEEGKNKTKAKKKRKRRPRYPKGFDPANPGPSPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHDPGATSNKANQVGVATKGVMQNAVAEQTKPSSKSRKKSRN 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00024 665 MobiDBLite consensus disorder prediction 630 654 - -
Bva05g00024 665 PANTHER SIGNAL RECOGNITION PARTICLE 72 15 663 IPR026270 GO:0006614
Bva05g00024 665 PIRSF SRP72 15 665 IPR026270 GO:0006614
Bva05g00024 665 Pfam Putative TPR-like repeat 59 154 IPR031545 -
Bva05g00024 665 MobiDBLite consensus disorder prediction 1 22 - -
Bva05g00024 665 Pfam SRP72 RNA-binding domain 555 603 IPR013699 GO:0006614|GO:0008312|GO:0048500
Bva05g00024 665 Gene3D Tetratricopeptide repeat domain 21 170 IPR011990 GO:0005515
Bva05g00024 665 SUPERFAMILY TPR-like 21 212 IPR011990 GO:0005515
Bva05g00024 665 MobiDBLite consensus disorder prediction 555 665 - -
Bva05g00024 665 SUPERFAMILY TPR-like 237 490 IPR011990 GO:0005515
Bva05g00024 665 Gene3D Tetratricopeptide repeat domain 176 566 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00024 Bva-Chr5 116909 121646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00024 K03108 - zju:107428395 1010.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00024 05 116909 121646 Bva05g00024 05 116909 121646 ECH