Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00023 atgttCAAACAAATACTTAGTAAACTTCCTCGAAAGTCGTCTAAAGCCTCTGAATTTCGTGAACAAGGTGGAAGTGGAAGtggaaatagaaattatgcTGTTTATTCAAGTACTTCATCCACCCCTGGAGGCAGTGATCTAGGTAGCAGTAAGTATGGAAATTCTTCAATTACACAAGCTCCTTTTTCTGCTTTCGATGCAAGACGATATCATGATGATAGAGTTATAACTGGTGCCAATGTGAATCCGAATGGGAACTCTGTGTCTCTCTCTTACGAAGCATTACCTGCATTCAGGGATGTTCCCAATTCTGAGAAGCAGAGCTTGTTTATAAAGAAGCTGAAGATGTGCAGTGTTGTGTTTGACTTCACTGACCCAACGAAGCACctcaaagaaaaggaaattaagcGACAGACCTTGGTAGAATTGGTGGATTATGTCACTTCTTCTAATACtaaatttacagaaaatgtAATACAAGAAGTTGTAAACATGGtatcattaaatatattcagGACACTTAGTCCTCAACAACGTGAGAATAAACATGTTGAAGCCCTTGATGTGGATGAGGAAGAGCCTTCAATGGATCCGGCATGGCCTCACTTGCAAATTGTGTATGAGCTTTTCCTAAGGTTAGTGGCATCCCCTGAGCTGGATGTAAAGTTGGCTAAAAGATACATTGATCAGTCCTTTATTTTGAAGCTGCTGGATTTGTTTGACTCTGAAGATCCTAGAGAACGGGAATACTTAAAAATGATTCTGCACCGCATCTATGGCAAATTTATGGCACATCGCCCTTTCATCAGGAAATTCATCAACAATGTCTTTTAtcgttttatttttgagaCAGAGAAGCATAATGGGATTGCTGAATTGCTAGAAATTCTGGGCAGCATCATTAATGGTTTTGCACTACCATTGAAGGAAGAGCATAAGCTGTTTCTTGTTCGTGTACTGATTCCTCTACACAAACCAAAATGTTTAGCAATGTACCATCAGCAATTATCTTATTGCATTACCCAGTCTGTGGAGAAAGATTGCAAACTTGCCGATACCATTATCAGGGGGTTATTGATGTACTGGCCAATAACTAATAGTTCAAAGGAAGTTATGTTCCTTAGTGAGTTGGAAGAAGTCTTGGAAGCAACTCAACCTCCAGAGTTCCAGCGCTGTATGGTGCCATTGTTTGGCCGGATTGCTCGCTGTCTAAATAGTCCACATTTCCAGGTGGCTGAAAGAGCTTTGTTCTTATGGAACAACGATCATATTGAGaacctaataaaaaagaattgcaaGGTTATACTGCCTATCATCTTCCCTGCATTGGAGAAAAATAGTAGAAGTCACTGGAACCAGGCTGTCCGTAGTCTGACCTTGAATGCACGGAAGATTTTCTATGATCTTGATCCCGATCTGTTCAATCAATGCCTACATAAGtttgaagaagatgaatcAAAGGAAGATGAAGTTACAGCTAAGCGTGAAGCCACTTGGAAACGCTTGGAGGAACTTGCTGCAAGTGGAAGTGGCTA 1535 0.3798 MFKQILSKLPRKSSKASEFREQGGSGSGNRNYAVYSSTSSTPGGSDLGSSKYGNSSITQAPFSAFDARRYHDDRVITGANVNPNGNSVSLSYEALPAFRDVPNSEKQSLFIKKLKMCSVVFDFTDPTKHLKEKEIKRQTLVELVDYVTSSNTKFTENVIQEVVNMVSLNIFRTLSPQQRENKHVEALDVDEEEPSMDPAWPHLQIVYELFLRLVASPELDVKLAKRYIDQSFILKLLDLFDSEDPREREYLKMILHRIYGKFMAHRPFIRKFINNVFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRVLIPLHKPKCLAMYHQQLSYCITQSVEKDCKLADTIIRGLLMYWPITNSSKEVMFLSELEEVLEATQPPEFQRCMVPLFGRIARCLNSPHFQVAERALFLWNNDHIENLIKKNCKVILPIIFPALEKNSRSHWNQAVRSLTLNARKIFYDLDPDLFNQCLHKFEEDESKEDEVTAKREATWKRLEELAASGSG 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00023 511 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 508 - -
Bva05g00023 511 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 508 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva05g00023 511 MobiDBLite consensus disorder prediction 1 52 - -
Bva05g00023 511 SUPERFAMILY ARM repeat 107 488 IPR016024 -
Bva05g00023 511 Gene3D - 102 505 IPR011989 -
Bva05g00023 511 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 95 506 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva05g00023 511 PIRSF PP2A_B56 1 510 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva05g00023 511 MobiDBLite consensus disorder prediction 19 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00023 Bva-Chr5 111968 116542 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00023 K11584 - qsu:112015578 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00023 05 111968 116542 Bva05g00023 05 111968 116542 ECH