Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00019 ATGGACTTGATGCAGTACCAGCTTACCCGGTTACCTTACCAAGATTCCTTGAAACTACTGGAGACTGATATTCAGCATGCAAATTCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGGTACTATTGTTCAAATGAAATTAGTTTACAATCACTTGGCTCCTGTATTTCTGTTCTTGCTACAATGGATGGATTGTTCTTGCGTATGTCTTCTACATAGATATCTGAATCTCTTTCACCTACTTATATATAAGGTACATAAAGATGGGAGATTGAACGTATCTACTCACGGAAGGAAGGCAACTATCAAGGACTTCTATGCCGTTATTTTGCCATCTCTCCAGCGGCTACATTGTAGCTGTAGCTTGGGGAAGTTAGAGATTTCTGAAGAAGGGCAGTCTAGCATAGAAGGTGAGAGAATTGAAGTTGATGGGAGAGTTAGCAATGTCgatttagagagagaagatgAATGTGGGATCTGCTTGGAGCCTTGCACCAGAATGGTTTTGCCTAATTGCTGTCATGCCATGTGTATCAAATGCTACCGCAAGTGGAACACACGATCAGAGTCTTGTCCCTTTTGTCGTGGTAGCTTGAGGAGAGTTAATTCGGAGGACTTATGGGTGCTCACTTGTAATGAAGATGTTGTTGATGCTGAGACTGTTTCCAAGGAGGACTTGTTGCGTTTCTACCTTTATATCAACAGCCTACCTAAAGATTACCCAGATGCCCTTTTCATAATGTATTATGAATACCTCATTTG 761 0.41 MDLMQYQLTRLPYQDSLKLLETDIQHANSLAAAIPRAKGGTIVQMKLVYNHLAPVFLFLLQWMDCSCVCLLHRYLNLFHLLIYKVHKDGRLNVSTHGRKATIKDFYAVILPSLQRLHCSCSLGKLEISEEGQSSIEGERIEVDGRVSNVDLEREDECGICLEPCTRMVLPNCCHAMCIKCYRKWNTRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVSKEDLLRFYLYINSLPKDYPDALFIMYYEYLI 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00019 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 206 IPR013083 -
Bva05g00019 253 SUPERFAMILY RING/U-box 148 199 - -
Bva05g00019 253 PANTHER RING FINGER PROTEIN 41, 151 6 253 - -
Bva05g00019 253 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Bva05g00019 253 ProSiteProfiles Zinc finger RING-type profile. 157 195 IPR001841 -
Bva05g00019 253 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 253 - -
Bva05g00019 253 SMART ring_2 157 194 IPR001841 -
Bva05g00019 253 Pfam Ring finger domain 155 195 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00019 Bva-Chr5 91265 93432 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00019 - - gmx:100499999 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00019 05 91265 93432 Bva05g00019 05 91265 93432 ECH