Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03480 ATGGACGCCATAAGGAAGCAACTGGACGTGTTGATGGGAGCGAATCGGAACGGAGATGTACGCGAGGTTAATCGCAAGTATTATGATCGTGACGTGTGCCGCCTCTACTTGGTCGGATTGTGCCCTCATGAGCTATTCCAGCTGACGAAAATGGATATGGGGCCATGTCCGAAGGTTCATTCGCTGCAGCTAAGGAAGGAATatgaagaagcaaaagcaaaaggaataGATAACTACGACAGAGAGTTGGAGGACGTTATAGATAAGCTGATTGCTGAATGTGATAGGAAAATTGGTAGAGCCCTGAAGCGCCTCGAGGATGAAGATGCAAAAGCTGCAATTGCAATTTCAGTCTCTGAAGTTACTCTGACACCTGAGGTCCTTGAGCTGTcaaaacaaatcaaagagaagTTGAAAGAAGCTGATCGATACgATCTTGAAGGCAAGACAGATCTCAAGATTCAAGCTTTGGAGGTTGTAGAGGAACTTAGAACTAAAAGAGCAGACAAACAGTCCATGCTTCTTTTGGATGCCTTTAACAAAGACAGGGCATCTTTACCTCAACCCCTGCCAAATCCTCCACCTGTGGCACCGCTGCCTGTTGTTGCTCCTGATCCACGCACACAAGAGATGATAAATGAAAAGTTGCAGAAGGCAGAGGATCTTGGCGAGCAAGGGATGGTTGATGAAGCACAGAAAGCATTGGAAGAGGCTGAAGCACTGAAGAAGCTTTCTACCTGGCAGGAGCCAGTTTTGGATTCTTCAAGGTATACGGCAGCAGATGTGCGCATTACAGATCAGAAGCTACGTGTTTGTGACATTTGCGGAGCATTTTTGAGTGTTTATGATagtGATCGACGTTTAGCTGATCATTTTGGAGGGAAGCTTCATTTGGGGTATATGCAGATCCGTGAGAAGTTGGCAGAACTTCAGGTGCTGGAAGAAAGGAACAAGAGTCGCAAGATTGAGCGGTACGACGAGAGGAGatcAAAAGGACAAAGCAGGGACCGTGACAGCAGGGATGAAGAGCGCGGTGATAGTCGTGAAAGAGGGAGAGACTATGAACGTAGGAGCAGGGATCGGGATCGCGATCGCGATCGCTATTATGATCGAGATCGTGGCAGAGACTTAGATCGCTCCCGGTCTTATGAATCACGAAGGCGTAGAAGGTCGCGGTCACGATCAAGAGAACGTTCTAGAGACTATGATCGTCACAGGCGTCACGATCGTTATTA 1235 0.4591 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEAKAKGIDNYDRELEDVIDKLIAECDRKIGRALKRLEDEDAKAAIAISVSEVTLTPEVLELSKQIKEKLKEADRYDLEGKTDLKIQALEVVEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPPPVAPLPVVAPDPRTQEMINEKLQKAEDLGEQGMVDEAQKALEEAEALKKLSTWQEPVLDSSRYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKIERYDERRSKGQSRDRDSRDEERGDSRERGRDYERRSRDRDRDRDRYYDRDRGRDLDRSRSYESRRRRRSRSRSRERSRDYDRHRRHDRY 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03480 409 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 405 IPR004882 GO:0003729|GO:0005685|GO:0006376
Bva04g03480 409 MobiDBLite consensus disorder prediction 394 409 - -
Bva04g03480 409 MobiDBLite consensus disorder prediction 314 382 - -
Bva04g03480 409 MobiDBLite consensus disorder prediction 314 409 - -
Bva04g03480 409 Pfam LUC7 N_terminus 208 326 IPR004882 GO:0003729|GO:0005685|GO:0006376
Bva04g03480 409 Pfam LUC7 N_terminus 2 171 IPR004882 GO:0003729|GO:0005685|GO:0006376
Bva04g03480 409 PANTHER BNAC02G44170D PROTEIN 1 405 - -
Bva04g03480 409 Coils Coil 300 320 - -
Bva04g03480 409 Coils Coil 127 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03480 Bva-Chr4 27521115 27527138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03480 - - gmx:100793888 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03480 04 27521115 27527138 Bva04g03480 04 27521115 27527138 ECH