Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03478 ATGGCTCTCAACCTCTGTGTGTGTCCCAGTCCCAAGTCCGTGTTCTGCTCCGCTACTGCCAACCAACCGATTCCGATGATCTTGTTGGATCCGTCATCCAATGCTACGGCTAGAACTAGATTCTCATTCTCGAGTGCTTCCAACTCCAAGAATAGTGTGAATATGGGCATGGCCGTGGATGGTTTGAGTTTGAGAACTAGAAGCGATAGGGTTCTTACGGTAACGAGGTCGGGCTTTGACACTGCCGGCGCCACAGTGGGCCAGGTCACCGAGGTCAACAAGGATACCTTCTGGCCGATCGTTaacgccgccgccgccgccgacAAGACAGTCGTCCTCGACATGTACACCCAATGGTGTGGTCCTTGCAAAgtgatagctccaaagtttgaACAACTGTCGGAGAAGTATCTTGATGTTGTGTTTCTGAAGCTTGATTGTAACCAAGAAAACAAGCCTTTGGCGAAAGAGCTGGGGATTAGAGTGGTTCCTACTTTTAAAATTCTCAAGGACGCCAAGGTTGTAAAAGAAGTTACTGGGGCCAAATTTGATGATTTAGTCCTTGCCATAGAATCTGTTAGATCTAGTTA 590 0.4424 MALNLCVCPSPKSVFCSATANQPIPMILLDPSSNATARTRFSFSSASNSKNSVNMGMAVDGLSLRTRSDRVLTVTRSGFDTAGATVGQVTEVNKDTFWPIVNAAAAADKTVVLDMYTQWCGPCKVIAPKFEQLSEKYLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKDAKVVKEVTGAKFDDLVLAIESVRSS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03478 196 Pfam Thioredoxin 89 189 IPR013766 -
Bva04g03478 196 ProSitePatterns Thioredoxin family active site. 112 130 IPR017937 -
Bva04g03478 196 PANTHER THIOREDOXIN F2, CHLOROPLASTIC 54 196 - -
Bva04g03478 196 Gene3D Glutaredoxin 72 195 - -
Bva04g03478 196 PRINTS Thioredoxin family signature 159 170 - -
Bva04g03478 196 PRINTS Thioredoxin family signature 111 119 - -
Bva04g03478 196 PRINTS Thioredoxin family signature 119 128 - -
Bva04g03478 196 CDD TRX_family 102 191 - -
Bva04g03478 196 PANTHER THIOREDOXIN 54 196 - -
Bva04g03478 196 ProSiteProfiles Thioredoxin domain profile. 80 195 IPR013766 -
Bva04g03478 196 SUPERFAMILY Thioredoxin-like 83 193 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03478 Bva-Chr4 27515136 27516861 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03478 K03671 - fve:101291254 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03478 04 27515136 27516861 Bva04g03478 04 27515136 27516861 ECH