Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03475 ATGgctctcttcctctctcttaAGGCCTGCGTCCCTTTCATTATTTGCAAGGCATCCATGGATAATCGCAACAATGGAAGCCACGTGCTAGAAGCAACTTATATCCGACGCGCCGCCCTGGTAGCAGACAGATCCGCTGGCTTCACATCCCCCCACCCCAATTTTGGCTGCGTGATTGCTACCGGAGATGGGAACATCGCTGGAGAGGGTTTCCTCTATGCCCAGGGTACTAAACCGGCTGAGGTCCAGGCTGTAGAGGCCGCTGGTGAACTTTGCCGTGGCGCTACTGCATACCTCAACATGGAACCTGGGGATTGTCATGGTGACCACACTGCTGTATCTGCTCTCGTCCAGGGAGGTATTACAAGAGTTGTCATTGGAATGAGACATCCTTTGCAACATCTCCGGGGCAGTGCTGTGCGTGCATTAAGAAGTCAAGGAGTTCATGTTGATGTTCTCGGGGAGGATCTAAGAAGTAAACTCATTGAGGAAGCTcgaaaaatatgttttcttgTCAACGCCCCTTTGATTTGTAGAGCTGCTTCACGACTCCCCTTTTCAGTTCTTAAGTATGCTATGACCCTTGATGGAAAAATTGCTGCTAGCAGTGGGCATGCAACATGGATTAGCAGCAAGCAGTCTCGAAATCTAGTATTTGAATTACGGGGTAGAAGTGATGCTGTAATTGTTGGAGGAAACACAGTACGAAGGGACAATCCAAGATTGACAGCAAGACACGGAGGTGGACATATGCCAGTTCGTATTGTGATGAGCCAGACTCTTAATCTTCCAGAGGAAGCAAACTTATGGGACATGTCTGAGGTTTCTACCATAGTTGTAACACAGAGGGGTGCTCGGAGGAGTTTCCAGAAGCTTCTTGCTTCTAAAGGTGTTGAAGTTGTAGAGTTTGACATATTAAATCCCCGGGATGTTATGGAATATTTTCATGATCGTGGGTGTCTTTCAATTTTATGGGAATGTGGAGGAACGTTAGCTGCTTCTGCGATTTCATCTGGAATAATTCACAAGGTTTTTGCATTCGTTGCTCCTAAAATTATTGGTGGCAAGAGTGCACCATCTCCTGTGGGTGATCTTGGGATGGTTGAGATGTCTCAGGCCTTAAATCTGATTGATGTTTGCTATGAGCAGGTTGGACCTGACATGCTTATTAGTGGATTTCTTCAGCCTTTACCTGACATGACACCTACTATTCCATCAGTGGATGAAACTTTTGCCGTTGATCCTACTGTCTCTCCATATGAATCAAGcatcatatttttctataaaacatGGGATCCTTACGGTGCGTTTTCGAATTTCTCTCCTCATCCCATTCAAATGCCTGATGGAAGTGGGGATTATGTAACTTGGTTGAGCGTTGAACACTACTACCAGGCACACAAGTTTGTTGGGGTGAATGATCCTTTGGCACAAAAATGTGTTGAAAGGATTAAATCTGCAAAAAGCCCAGAAGAAGCTGCAAGAATCGGAAGGTCAATGCAGAGGCAGCAACCTCATCTGATAAGGTCTGATTGGGACAACATAAAGATTGATGTCATGTACAAGGCACTCAAGTCCAAATTCTCAATCTATCCGCATTTGAATTGTATGCTGGTCTCAACTGCTGGGTCCGTTCTTGTTGAGGCTTCACCGCATGATCTGTTCTGGGGTGGAGGCCGGGATGGTGAAGGATTAAATTATCTTGGCAGACTATTGATGCAATTGAGATCGGAATTTCTTGGCGAGTCCTCTTCATCAAGTGAGATCTCGTGTTTAGCTGTATA 1784 0.4451 MALFLSLKACVPFIICKASMDNRNNGSHVLEATYIRRAALVADRSAGFTSPHPNFGCVIATGDGNIAGEGFLYAQGTKPAEVQAVEAAGELCRGATAYLNMEPGDCHGDHTAVSALVQGGITRVVIGMRHPLQHLRGSAVRALRSQGVHVDVLGEDLRSKLIEEARKICFLVNAPLICRAASRLPFSVLKYAMTLDGKIAASSGHATWISSKQSRNLVFELRGRSDAVIVGGNTVRRDNPRLTARHGGGHMPVRIVMSQTLNLPEEANLWDMSEVSTIVVTQRGARRSFQKLLASKGVEVVEFDILNPRDVMEYFHDRGCLSILWECGGTLAASAISSGIIHKVFAFVAPKIIGGKSAPSPVGDLGMVEMSQALNLIDVCYEQVGPDMLISGFLQPLPDMTPTIPSVDETFAVDPTVSPYESSIIFFYKTWDPYGAFSNFSPHPIQMPDGSGDYVTWLSVEHYYQAHKFVGVNDPLAQKCVERIKSAKSPEEAARIGRSMQRQQPHLIRSDWDNIKIDVMYKALKSKFSIYPHLNCMLVSTAGSVLVEASPHDLFWGGGRDGEGLNYLGRLLMQLRSEFLGESSSSSEISCLAV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03475 594 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 29 139 IPR002125 -
Bva04g03475 594 TIGRFAM ribofla_fusion: conserved hypothetical protein 425 578 IPR012816 -
Bva04g03475 594 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 13 413 - -
Bva04g03475 594 Gene3D - 416 586 IPR037238 -
Bva04g03475 594 Gene3D Dihydrofolate Reductase, subunit A 177 393 IPR024072 -
Bva04g03475 594 TIGRFAM eubact_ribD: riboflavin biosynthesis protein RibD 36 389 IPR004794 GO:0008835|GO:0009231
Bva04g03475 594 SUPERFAMILY YbiA-like 413 581 IPR037238 -
Bva04g03475 594 Pfam RibD C-terminal domain 187 389 IPR002734 GO:0008703|GO:0009231
Bva04g03475 594 TIGRFAM ribD_Cterm: riboflavin-specific deaminase C-terminal domain 184 390 IPR011549 GO:0008703|GO:0009231|GO:0050661
Bva04g03475 594 CDD Riboflavin_deaminase-reductase 35 147 - -
Bva04g03475 594 CDD NADAR 423 576 IPR012816 -
Bva04g03475 594 SUPERFAMILY Dihydrofolate reductase-like 184 391 IPR024072 -
Bva04g03475 594 SUPERFAMILY Cytidine deaminase-like 32 152 IPR016193 GO:0003824
Bva04g03475 594 Pfam NADAR domain 426 579 IPR012816 -
Bva04g03475 594 Gene3D Cytidine Deaminase, domain 2 29 159 - -
Bva04g03475 594 PANTHER RIBOFLAVIN BIOSYNTHESIS PROTEIN PYRR, CHLOROPLASTIC 13 413 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03475 K11752 - gmx:100801283 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03475 04 27501235 27505106 Bva04g03475 04 27501235 27505106 ECH