Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03473 ATGGCAGACGTTACTGATGCAGCCATGGACGCCGTACAGAGACGCCTCATGTTCGAAGACGAATGCATTTTAGTGGATGAGAATGATCGTGTAATTGGTCACGACTCCAAGTACAACTGTCATTTGATGGAAAAGATCGAATCCGAAAATTTGCTACATAGAGCTTTCAGTGTATTTCTGTTCAACTCAAAGTATGAGTTGCTTCTTCAGCAACGATCTGCAACAAAGGTAACGTTCCCTCTTGTGTGGACAAACACCTGCTGCAGCCATCCACTTTACCGCGAATCTGAACTTATTGGGGAGAATGCCCTTGGGGTGAGAAATGCGGCTCAGAGAAAACttttggacgaacttggtattCCTGCGGAAGATGTGCCAGTTGATCAGTTCACTCCATTGGGCCGTATGCTTTACAAGGCACCTTCTGATGGCAAATGGGGAGAGCACGAACTTGATTACCTGCTATTTATTGTACGGGATGTTAAGGTTAATCCAAACCCAGACGAAGTGGCCGACGTTAAATATGTGAACCGTGATCAGTTGAAGGAGCTGTTGAGGAAAGCCGATGCTGGCGAGGAAGGTTTGAAGCTGTCCCCTTGGTTCAGACTAGTTGTGGATAATTTCTTATTCAAGTGGTGGGACCATCTCCAGAATGGGACTCTTGAGGAGGTCGTCGACATGAAAACCATTCACAAGCTGACTTG 704 0.4517 MADVTDAAMDAVQRRLMFEDECILVDENDRVIGHDSKYNCHLMEKIESENLLHRAFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIGENALGVRNAAQRKLLDELGIPAEDVPVDQFTPLGRMLYKAPSDGKWGEHELDYLLFIVRDVKVNPNPDEVADVKYVNRDQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLQNGTLEEVVDMKTIHKLT 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03473 234 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 233 - -
Bva04g03473 234 Pfam NUDIX domain 52 190 IPR000086 -
Bva04g03473 234 PANTHER ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE I-LIKE 3 233 - -
Bva04g03473 234 PANTHER ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE 3 233 - -
Bva04g03473 234 TIGRFAM IPP_isom_1: isopentenyl-diphosphate delta-isomerase 22 204 IPR011876 GO:0004452|GO:0008299
Bva04g03473 234 SUPERFAMILY Nudix 21 216 IPR015797 -
Bva04g03473 234 ProSiteProfiles Nudix hydrolase domain profile. 51 203 IPR000086 -
Bva04g03473 234 PIRSF Isopentenyldiphpt_isom 1 229 IPR011876 GO:0004452|GO:0008299
Bva04g03473 234 CDD IPP_Isomerase 19 206 IPR011876 GO:0004452|GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03473 Bva-Chr4 27490744 27494041 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03473 K01823 - csin:114293715 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03473 04 27490744 27494041 Bva04g03473 04 27490744 27494041 ECH