Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03462 ATGGCATCGTTGTTTCTCTATCATGTCGTTGGCGATCTGACGGTCGGGAAGCCGGAGTTGGTGGAATTTCACGAGACAGAGACGGTAGAATCGGCTATTCGGGCAATCGGAGAATCAACTGAACGTAGTTTACCCATCTGGAAGAGGAAGTCGCATGTGGGTATGATTGAGAATAGTGAAATGAGACAGCAGAGATTTGTAGGCATCCTTAATTCCTTGGATATAGTTGCATTTTTGGCAAGAAGCGAGTATTTTGAGGATCAAGAAAAGGCCACGAAGACCCCTGTTTCTGAGGTTGTCGTTCCAAATAATTCTCTACTGAGACAGGTTGATCCTGCAACAAGGTTGATAGATGCACTGGAGATGATGAAGCAAGGTGTGAGACGTCTTCTTGTTCCAAAGAGTGTAATATGGAGAGGCATGAGTAAGCGTTTCTCAGTTCTCTATAACGGCAGATGGCTCAAGAATATTGAAACTTCtagcagcagcagcaattTGCCTTCAAACGTGAATCGAGGCTCCTCATCTTCCAACACCCACACCGGTGATAAGTTCTGCTGTCTTTCAAGAGAAGATGTCCTCCGTTTTATCATTGGTTGCCTTGGAGCTCTAGCACCACTGCCTCTCACCTCTATCTCAGCTCTCGGAGCAATTAATACAAACTACGAATTTATTGAGTCGACCACTGCAGCCATTGAAATAACCCGGAAGCTTCCTGAAGACCCCAGTGCAGTTGCAGTGATTGAAAGCACACCGGATGGTCAGCGTAAGATAATTGGAGAAATTTCTGCATGTAAGTTTTGGCAATGTGATTACTTAGCTGCAGCTTGGGCTTTAGCCAATCTTTCAGCTGGACAGTTCGTAATGGGAGTTGAGGATAATGCAACCTCAAGGACACTGCCTGAGTTGTGTGTAAATTCAACAGTCGGTGATAATAGTCTAGCTAATAGTGGTGATTCAAGAAGACCAAAGAAATTCAGTAGCCGGAGTATTGGGTTCTTTAGTAATCCTGCAAGCCATAATCTTGGTGTCAATAGGAGCATGTATAGGGGTAGGAGTGCGCCTTTGACATGTAAAGTTAATAGTTCATTGGCTGCTGTCATGGCGCAGATGCTATCGCACAGGGCAACTCAAGTGTGGGTGACAGAGGAAGAGAATGATGATGTTTTGGTTGGCGTGGTGGGATATGCTGATATTTTGGTTGCTGTAACCAAACAACCTGCAGACTTTATGCCTGCATTTAAATCTACTGAGGCGTTTGGAAATGAAATTCAGAGTtg 1280 0.4391 MASLFLYHVVGDLTVGKPELVEFHETETVESAIRAIGESTERSLPIWKRKSHVGMIENSEMRQQRFVGILNSLDIVAFLARSEYFEDQEKATKTPVSEVVVPNNSLLRQVDPATRLIDALEMMKQGVRRLLVPKSVIWRGMSKRFSVLYNGRWLKNIETSSSSSNLPSNVNRGSSSSNTHTGDKFCCLSREDVLRFIIGCLGALAPLPLTSISALGAINTNYEFIESTTAAIEITRKLPEDPSAVAVIESTPDGQRKIIGEISACKFWQCDYLAAAWALANLSAGQFVMGVEDNATSRTLPELCVNSTVGDNSLANSGDSRRPKKFSSRSIGFFSNPASHNLGVNRSMYRGRSAPLTCKVNSSLAAVMAQMLSHRATQVWVTEEENDDVLVGVVGYADILVAVTKQPADFMPAFKSTEAFGNEIQS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03462 426 Gene3D - 334 405 IPR046342 -
Bva04g03462 426 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 411 - -
Bva04g03462 426 SUPERFAMILY CBS-domain pair 5 132 IPR046342 -
Bva04g03462 426 CDD CBS_pair_SF 23 132 - -
Bva04g03462 426 SUPERFAMILY CBS-domain pair 346 407 IPR046342 -
Bva04g03462 426 ProSiteProfiles CBS domain profile. 348 410 IPR000644 -
Bva04g03462 426 MobiDBLite consensus disorder prediction 160 181 - -
Bva04g03462 426 Gene3D - 1 135 IPR046342 -
Bva04g03462 426 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX6 1 411 - -
Bva04g03462 426 Pfam CBS domain 354 402 IPR000644 -
Bva04g03462 426 SMART cbs_1 19 80 IPR000644 -
Bva04g03462 426 SMART cbs_1 354 404 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03462 Bva-Chr4 27448303 27451292 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03462 - - ccaj:109814707 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03462 04 27448303 27451292 Bva04g03462 04 27448303 27451292 ECH