Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03447 ATGACATTGCTTTTCCCTTGTTTTGGCGGATATATGGCTAATCATTCCTTAGTTTTAGCTGATGCTAATCTTGATTTAGTGGGACAGCCTCTAGTCATTGGGCAAGAATTTCCAGATGTGGAAACCTGCAGAAGAGCATTAAAAGATATTGCTATAGCTATGCATTTTGATCTTCGTATAGTTAAATCTGATCGGAGTCGCTTTATAGCAAAATGCTCCAAAGAAGGTTGCCCATGGCGTGTACATGTGGCAAAATGTCCTGGTGTTCCGACTTTTACGATAAGAACCCTACATGCAGAGCATACTTGTGAAGGAGTTCAAAACCTTCATCATCAGCAGGCATCCGTAGGTTGGGTTGCAAGATCTGTAGAAGCAAGGATTCGAGACAATCCACAATACAAACCAAGGGAAATACTGCAAGATATTCGTGATCAGCATGGAGTAGCTGTTTCTTACATGCAAGCTTGGCGTGGGAAGGAGCGGAGCATGGCTGCACTTCATGGAACATTTGAAGAAGGCTATCGTCTTCTTCCTGCATATTGTGAGCAGATAAGGAAAACCAATCCTGGTAGCATTGCATCAGTTGTTGCTACTGGACAAGAAAATTGTTTCCAGCGcctgtttgtttcttttcgtGCTTCAATTTATGGGTTCATAAATGCTTGTAGGCCACTTTTAGATCTTGACAGAGCACATCTTAAAGGGAAATACTTGGGTACGTTACTTTGCGCTGCAGCTGTGGATGCTGATGATGCTCTGTTTCCTTTAGCCATTGCTGTTGTTGATACCGAAAGTGATGAAAATTGGATGTGGTTCTTGTCAGAATTGCGAAAGCTTTTAGGAGTAAACACTGACAACATGCCTAGACTTACAATACTATCTGAACGGGGACAGGGCATGGTAGAAGCAGTAGAAACACACTTTCCAAGTGCTTTTCATGGTTTCTGTCTGCGTTATGTTAGTGAAAATTTCCGTGATACATTTAAGAACACTAAGTTGGTCAACATTTTTTGGAATGCTGTTTATGCCCTTACAGCTGTTGAATTTGAAAGCAAGATTTCTGAGATGATAGAAATTTCTCAGGACGTTATACTATGGTTTCAACGGTATCCTCCTCAACTTTGGGCTGTGGCGTACTTTGAGGGTGTTCGATATGGCCATTTCACGCTGGGGGTGACAGAGTTATTATATAACTGGGCACTTGAATGTCATGAGCTCCCTATAGTGCAGATGATGGAACACATCCGCCAGCAGATGACATCTTGGTTTGATGATCGCCGGGATATGGGCATGAGATGGACATCAATTCTTGTACCATCTGCTGAGAAGCGGGTTCTGGAAGCCATCGCTGATGCTCATTGCTATCAAGTACTCCGGGCAAATGAAGTTGAGTTTGAGATTGTGTCAACTGAGAGAACAAATATTGTGGATATACGGAGTCGTGTGTGCTCTTGTCGCCGTTGGCAGCTGTATGGTTTACCTTGTGCCCATGCTGCAGCTGCACTTATTTCTTGTGGCCACAATGCTCATCTATTTGCTGAACCTTGTTTCACGGTGCAAAGTTACAGAGTAACCTATTCGCAGATGATAAATCCTATTCCAGATAAGAGTCAGTGGAGAGAACAAGGGGAAGGGGCGGAGGGTGGAGGTGCTAAGGTTGACATCGTAATACGCCCACCAAGGACTCGCCGACCACCTGGAAGGCCTAAAAAGAAGGTTCTTCGAGTAGAGAACTTAAAGCGTCCCAAAAGAATTGTTCAATGTGGTCGCTGCCATATGCTAGGACATTCTCAAAAGAAATGCACAATGCCCATTTG 1817 0.432 MTLLFPCFGGYMANHSLVLADANLDLVGQPLVIGQEFPDVETCRRALKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTIRTLHAEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFVSFRASIYGFINACRPLLDLDRAHLKGKYLGTLLCAAAVDADDALFPLAIAVVDTESDENWMWFLSELRKLLGVNTDNMPRLTILSERGQGMVEAVETHFPSAFHGFCLRYVSENFRDTFKNTKLVNIFWNAVYALTAVEFESKISEMIEISQDVILWFQRYPPQLWAVAYFEGVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQQMTSWFDDRRDMGMRWTSILVPSAEKRVLEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRVCSCRRWQLYGLPCAHAAAALISCGHNAHLFAEPCFTVQSYRVTYSQMINPIPDKSQWREQGEGAEGGGAKVDIVIRPPRTRRPPGRPKKKVLRVENLKRPKRIVQCGRCHMLGHSQKKCTMPI 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03447 605 Pfam SWIM zinc finger 472 505 IPR007527 GO:0008270
Bva04g03447 605 Pfam MuDR family transposase 31 94 IPR004332 -
Bva04g03447 605 Pfam MULE transposase domain 226 323 IPR018289 -
Bva04g03447 605 SMART 26again6 481 508 IPR006564 GO:0008270
Bva04g03447 605 PANTHER MUDR FAMILY TRANSPOSASE ISOFORM 1 30 603 - -
Bva04g03447 605 ProSiteProfiles Zinc finger SWIM-type profile. 465 506 IPR007527 GO:0008270
Bva04g03447 605 PANTHER POLYPROTEIN, PUTATIVE-RELATED 30 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03447 Bva-Chr4 27376390 27380117 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03447 - - gmx:100808214 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03447 04 27376390 27380117 Bva04g03447 04 27376390 27380117 ECH