Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03438 ATGCTTGAACCAATGATCACCGGATTGCAAGAATCTTTGCCAAAGTCAATTGGACTTTTGCCTTTTGATGGAGGTGTAACAGGTTGTGTGAGACTTGTTAAGGAACATCTAAACTGGGGGACAAAATCTGAGCTTAAAGCAGAGGTTCTTTGTGGCATAAAAGAGATAGGAAGTGTCCTCTACTGGATGGGGCTTCTGGATTTTGTCTTGAGAGAGATGGATACAATGAATTTTATGCAAACTGCTCCCTGGTTGGGCTTGCTTCCGGGTGCAGATggacaaatattaaattctcaagatgGCGGAGACAGCCCTGTTGTCAGCCTTTTTAAATCAACAACTGTTGCAATGGTATCAAACCGTGGATGCCCAAGTCCAGGATCTTTCCAAATACTGTCAAAACAGGCAGAAGCTGCAGATCTTCTATATAAGGCTAACTTGAATACTGGAAGTGTGTTGGAGTATGCCCTTGCTTTCACAAGTGCTGCATTAGATAAATACTGCAGTAAATGGAGTGCTGTGCCCAAGACAGGCTTCATTGACATTACAACTTCCAAAGATTTCTACCGTGTATATAGTGGCCTCCAAATTGAATATTTAGAGGAGTCTGTTCAAGTACAATCGAACAGTCACGAAAGGCTTGGTGATTCAGTAGCTTGGGGTGGTTGTACCATAATATATTTGCTCGGGCAACAGCTACATTTTGAGCTCTTTGACTTTTCATATCAGATTCTCAATATTGCAGAAGTGGAGGCTGCATCTGTCATACAACCAAATAAGAACTCGCATTTTGCTGTACAGGGATGGGAATCCTTATTGGAAGCAATGAAGAAAGCTAGGAGGTTAAATAACCATGTATTCTCTATGCTGAAAGCGCGCTGCCCTCTTGAAGAAAAGACAGCCTGCGCTATTAAACAAAGTGGCGCTCCGTTGCATCGGATTAAATTCGAGAACACAGTTTCTGCATTTGAAACACTGCCACAGAAAGGAGCGTA 995 0.4171 MLEPMITGLQESLPKSIGLLPFDGGVTGCVRLVKEHLNWGTKSELKAEVLCGIKEIGSVLYWMGLLDFVLREMDTMNFMQTAPWLGLLPGADGQILNSQDGGDSPVVSLFKSTTVAMVSNRGCPSPGSFQILSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSAVPKTGFIDITTSKDFYRVYSGLQIEYLEESVQVQSNSHERLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAASVIQPNKNSHFAVQGWESLLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPLHRIKFENTVSAFETLPQKGA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03438 331 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 2 303 IPR008081 GO:0030833|GO:0031267
Bva04g03438 331 PIRSF CYFIP 1 331 IPR008081 GO:0030833|GO:0031267
Bva04g03438 331 Pfam Cytoplasmic Fragile-X interacting family 2 290 IPR008081 GO:0030833|GO:0031267
Bva04g03438 331 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN 2 2 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03438 Bva-Chr4 27314563 27343615 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03438 K05749 - gmx:100775991 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03438 04 27314563 27343615 Bva04g03438 04 27314563 27343615 ECH