Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03436 ATGTCCACTCTCCTCTTGCCTTATACCTCTGTCCCCTTCAGATTGAATCGCTTATCTCCCCGGAGAGTGGTCATTCGCGCGGCAGTTTCAACTCCTGAGAAGCGAACGAGAAGGAAGAGGCAGCCCAAAGATGATGACTCCGCCGTCGAGAATGGGCTCCGCTTCACTTTCATGGAGGAGCTCATGGACCGGGCTCGGAACCGCGACTCTGCTGGCGTCTCTGAGGTCATTTACGACATGATTGCGGCTGGTCTTAGCCCAGGTCCTAGGTCCTTCCATGGCTTGATTGTGTCCCACGTCCTAAACGGTGATGAAGAAGCTGCGATGGAATCACTGAGAAGAGAGCTGAGTGCTGGGCTTCGCCCTGTTCATGAAACATTTCTGGCATTGATTAGATTATTTGGGTCAAAAGGACGTGCAGTAAGAGGTCTAGAAATACTTGCAGCTATGGAAAAGCTAAATTATGATATTCGCCAAGCTTGGATAGTCCTTACTGAGGAACTTGTCCGGAACAACCATTTGGAAAATGCCAACAAAGTTTTCTTGAAGGGTGCCAAAGGTGGGTTGAGAGCTACTGATGAGCTTTATGATCTTTTAATTGAGGAGGATTGCAAAGTGGGGGATCATTCTAATGCCTTAGAAATTTGCTATGAGATGGAGGCAACTGGGAGGATGGCAACaacatttcatttcaattgtCTGCTCAGTGTGCAGGCTACCTGCGGAATACCTGAAATAGCTTTTGCAACATTTGAGAACATGGAATACGGCGAAGATTACATGAAACCTGATACAGAGACATATAATTGGGTTATTCAAGCATACACTAGAGCTGAATCTTATGACAGAGTACAGGATGTTGCTGAGTTACTGGGCATGATGGTTGAAGATCACAAGCGCATACAGCCAAATGTGAAGACCCATGTGCTGTTAGTGGAGTGTTTTACCAAGTACTGTGTTGTACGAGAAGCTATTAGGCATTTTCGTGCCCTCAAGAACTTTGAAGAGGGTACAAAGGTTCTGCATAATGAAGGGAATTTTGGAGATCCACTTTCTTTGTATCTTCGGGCTTTATGTCGAGAAGgAAGGATTGTTGATATGCTTGAGGCTTTAGAATCTATGGCCAAAGATAACCAGCCAATCCCACCACGGGCAATGATCTTGAGTAAAAAGTACCGGACATTAGTGAGTTCATGGATTGAACCTCTACAGACGGAGGCTGAACTTGGTTATGAGATTGATTACATTGCAAGATATATTGCCGAGGGTGGCCTTACTGGAGAGCGCAAGCGATGGGTGCCTCGACAAGGGAAAACACCTTTAGACCCTGATGCTGCTGGATTTATATATTCGAATCCAATGGAAACCTCCTTCAAACAAAGATGTCTTGAGGAGTGGAAGTTGCATCATCGGAAGGTCCTGAAGACTTTACAGAATGAAGGACTTGCAGCTTTAGGGGATGGTGCATCTAAATCCGATTACATTAGAGTGGAGGAGCAgttaaagaaaatcataaaggGTCCTGAGCAGAATATTTTGAAGCCTAAGGCTGCAAGTAAGATGATAGTTTCTGAATTGAAGGAAGAACTAGAAGCACAAGGTCTGCCAACTGATGGAACCCGAAATGTTCTTTACCAGCGTGTGCAGAAAGCAAGACGAATAAATAGATCTCGTGGTCGGCCTCTTTGGGTTCCTCCTgtggaagaggaagaagaagagGTGGATGAAGAGCTGGATGCATTAATTTCACGTATTAAATTGGAGGAAGGAAATACTGAATTCTGGAAACGACGGTTTCTAGGAGAAGGCCTGACTGGTAACCATGGGAACCCAATAGATTCAGTCAAAACAGAGTCTCCTGAAACTCTAGATGATGTTGATGTTGTAGAAGATGCTGGAAAAGAGGTAGAAGATGATGAagctgatgatgatgatgaggcAGCAGAACAGGCTGAAGAGGAAGTAGAGCCAACTGACAACCAAGATATGGACAGGGTAAAGGACAAGGAAGCTGAAGCAAAAAAGCCCCTTCAAATGATTGGAGTTCAACTGTTCAAAGATTCTGACCAACCTAGTACCACATCTAAAAAGTCGAGAAAAATATCATCTCGGAAGTTTGTTGAGgatgatgataatgatgattGGTTTCCAGAGGACATATTTGAGGCATTTAAAGAGCTGAGAAAGCGGAAAGTGTTTGATGTATCAGACATGTATACCATAGCTGATGCTTGGAATTGGACGTGGGAGAGAGAACTGAAGAACAAACTTCCTCGTAGATGGTCACAAGAGTGGGAAGTTGAGTTGGCAATTAAAGTTGCTAAGAAGGTTATAGAACTGGGAGGAACACCAACGATAGGAGATTGTGCCATGATCTTGCGTGCAGCTATAAGTGCTCCTCTGCCTTCAGCTTTCTTGACGATATTGCAGATAACTCATAGTCTAGGCTATAAATTTGGGAGACCCCTCTATGATGAGGTCATCTCTCTGTGTCTTGATCTTGGAGAACTAGATGCAGCTGTTGCAGTCGTAGCTGACTTGGAGACAACGGGGATCATGGTTTCCGACCAGACCTTGGATAGGGTGATATCTACTAAACAGATGATTGACACTACTTCGAATGATGTTGCTTCGTA 2636 0.4306 MSTLLLPYTSVPFRLNRLSPRRVVIRAAVSTPEKRTRRKRQPKDDDSAVENGLRFTFMEELMDRARNRDSAGVSEVIYDMIAAGLSPGPRSFHGLIVSHVLNGDEEAAMESLRRELSAGLRPVHETFLALIRLFGSKGRAVRGLEILAAMEKLNYDIRQAWIVLTEELVRNNHLENANKVFLKGAKGGLRATDELYDLLIEEDCKVGDHSNALEICYEMEATGRMATTFHFNCLLSVQATCGIPEIAFATFENMEYGEDYMKPDTETYNWVIQAYTRAESYDRVQDVAELLGMMVEDHKRIQPNVKTHVLLVECFTKYCVVREAIRHFRALKNFEEGTKVLHNEGNFGDPLSLYLRALCREGRIVDMLEALESMAKDNQPIPPRAMILSKKYRTLVSSWIEPLQTEAELGYEIDYIARYIAEGGLTGERKRWVPRQGKTPLDPDAAGFIYSNPMETSFKQRCLEEWKLHHRKVLKTLQNEGLAALGDGASKSDYIRVEEQLKKIIKGPEQNILKPKAASKMIVSELKEELEAQGLPTDGTRNVLYQRVQKARRINRSRGRPLWVPPVEEEEEEVDEELDALISRIKLEEGNTEFWKRRFLGEGLTGNHGNPIDSVKTESPETLDDVDVVEDAGKEVEDDEADDDDEAAEQAEEEVEPTDNQDMDRVKDKEAEAKKPLQMIGVQLFKDSDQPSTTSKKSRKISSRKFVEDDDNDDWFPEDIFEAFKELRKRKVFDVSDMYTIADAWNWTWERELKNKLPRRWSQEWEVELAIKVAKKVIELGGTPTIGDCAMILRAAISAPLPSAFLTILQITHSLGYKFGRPLYDEVISLCLDLGELDAAVAVVADLETTGIMVSDQTLDRVISTKQMIDTTSNDVAS 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03436 878 Gene3D Tetratricopeptide repeat domain 34 159 IPR011990 GO:0005515
Bva04g03436 878 SUPERFAMILY SAP domain 518 554 IPR036361 -
Bva04g03436 878 Gene3D SAP domain 500 561 IPR036361 -
Bva04g03436 878 Gene3D Tetratricopeptide repeat domain 164 438 IPR011990 GO:0005515
Bva04g03436 878 Coils Coil 634 654 - -
Bva04g03436 878 MobiDBLite consensus disorder prediction 630 659 - -
Bva04g03436 878 PANTHER - 20 802 - -
Bva04g03436 878 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE 3 20 802 - -
Bva04g03436 878 ProSiteProfiles SAP motif profile. 518 552 IPR003034 -
Bva04g03436 878 MobiDBLite consensus disorder prediction 660 675 - -
Bva04g03436 878 Pfam SAP domain 519 551 IPR003034 -
Bva04g03436 878 MobiDBLite consensus disorder prediction 602 704 - -
Bva04g03436 878 SMART sap_9 518 552 IPR003034 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03436 75 374 Miscellaneous Gene Families AT4G11690 23.529 4.43e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03436 - - ccaj:109815736 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03436 04 27306248 27313693 Bva04g03436 04 27306248 27313693 ECH