Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03430 atggaagaagagaaagaggaatcGGTGTTGGTAACACCGGGAGAAGTGCTGGGTAGAGCCTCAGACGTGAAAACTGGAAGAGGTGCATATGTGGCGCTTCACAATAACACTGTCTACGCCTCTCTTACTGGTTTCCGCCGCAGTGTATCTCCTACCCCTGACTCCCCTGACCAGAGACCAACTGTTGAAGTAATTGGTCACAAGGCTCATGGAGCTGTTCCAGAGCCTGGATCTGTTGTCATTGCACGGATTACCAAAGTGATGGCTAGGATGGCTTCGGCAGATATTATGTGTGTAGGTCCCAAATCTGTTCGAGAAAAGTTTACCGGCATAATTAGACAGCAGGATGTAAGAGCAACTGAAATTGATAAAGTGGATATGCACCTATCTTTCCGTCCTGGTGACATTGTTCGAGCTCTTGTGCTTTCTCTTGGAGATGCACGAGCATACTATCTGTCAACTGCAAAGAATGAACTTGGTGTAGTCTCGGCAGAAAGCACTTCTGGTGCAACTATGGTTCCAATTAGTTGGACGGAGATGAAGTGCCCATTAACCCAtcaaattgagaaaagaaaggttGCAAAAGTAGCAAGCTG 596 0.4396 MEEEKEESVLVTPGEVLGRASDVKTGRGAYVALHNNTVYASLTGFRRSVSPTPDSPDQRPTVEVIGHKAHGAVPEPGSVVIARITKVMARMASADIMCVGPKSVREKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAESTSGATMVPISWTEMKCPLTHQIEKRKVAKVAS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03430 198 CDD S1_CSL4 73 162 - -
Bva04g03430 198 SUPERFAMILY Nucleic acid-binding proteins 73 193 IPR012340 -
Bva04g03430 198 Gene3D - 67 198 IPR012340 -
Bva04g03430 198 Pfam Exosome complex exonuclease RRP4 N-terminal region 10 47 IPR025721 -
Bva04g03430 198 PANTHER 3'-5' EXORIBONUCLEASE CSL4-RELATED 1 197 IPR039771 GO:0000178|GO:0006396
Bva04g03430 198 Gene3D - 10 65 - -
Bva04g03430 198 SUPERFAMILY Ribosomal L27 protein-like 10 46 - -
Bva04g03430 198 Pfam Exosome component EXOSC1/CSL4 103 144 IPR019495 GO:0000178|GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03430 Bva-Chr4 27260022 27263047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03430 K07573 - gmx:100796154 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03430 04 27260022 27263047 Bva04g03430 04 27260022 27263047 ECH