Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03216 ATGTCCgtctccttttcttctttatcgATTCCTTTATCGGAATCTTCTATTCGAAGACCAATCCATCGTTCCCCCGATACTCACAGAATCAACGCTGCTAGTTTTCCGGGTGCACCAATCATGTCGCATTCAGCAGCAAGTGGTTGTATTGTACTAAACGGTGGATCATCCAACTTGTGTCGACGATTTCGTGGTCTAAAACTCTGGATACTCGAGAGACTGAACTTTCAACAGCTGAGTGAAAATTGCCGACCGGTAATGGAGTCGAAGAGGATGACAAGTCAAGAAAGAAATCggctaaaaaataatttggaaaCGGATTTTTCAAGTGAAAAGGAGCCAGCTTCTCATGGATCTTCCGTGTTTGACGCTCCTAATGATAGCGTTACTTCCTCGGAGTCTTCGTCTTTGCCACAAACGAGTTCCTCCAATTCTCCAATTGATGTTATTAATAGAGCACCATCACTTTGCATTGCTGTCATCGGAGCCACGGGTGAATTAGCAAGGAGGAAGATTTTTCCAGCATTATTTGCTTTGTACTATAGTGGCTTCCTCCCCGAGGATGTTGGTATTTTTGGTTATTCAAGGAAGGATATAACTGACGAAGACCTGCGATCAGTCATAGCTTCAACACTGACATGCCGTGTTGATCATCAAGAAAATTGTGGGGATAAAATGGATGCTTTCCTTAATAGAACATACTACATTAATGGAGGCTATGACAACAGAAGTGGGATGTCCAAGCTAAATGCCCGCATGGAGCAGATTGAGGGAGGAGGCAAAGCTAACAGGATATTCTATCTTTCTGTTCCTCAAGAAGCACTTCTGGATGTTGCTTCATGTCTTGCTAGCGGCGCTCAGACCCGTAAGGGCTGGAATCGTATAATAATTGAGAAGCCATTCGGCTTTGACGCACTCTCTTCTCTTAGGCTGACGCAATCTCTTCTTTCCAAGTTTGaggaaaatcaaatatacaGGATTGACCATCTCTTAGGGAGGAATCTTATTGAAAACCTCACAGTTTTAAGGTTTTCAAATCTAGTATTTGAGCCGCTGTGGAGTCGTGCGTACATACATAACATACAGGTCGTTTTATCAGAAGACTTGGCTGTGCAACCTGGAAGGTATTTTGGTGGCTATGGGATTATACGTGACATCGTACACAGTCATGTGCTCCAAACGATAGCATTGCTTGCCATGGAACCACCAATAAGCCTTGATGGAGAAGATATTCGAAATGAAAAgGTCAAGGTTTTGAGGTCAATTCGCAAATTAGAACCTAGAGATGTCATTCTTGGCCAGTATAAAGCTAGTAGCGGAAACAAGGTTGATGTATGCTTAGACAGTCTGACGCCCACATATTTTGCTTCTGCTTTATATATTGACAATGCACGATGGGATGGTGTGCCATTTTTGGTGAAAACAGGCTTGGGACTCATTAAACACCAAATGGAGATACGCATTCAATTTCGTCATGTTCCAGGAAACATTTATCATGAATGCATTGGACATAATATTGACCGTGCCACTAATGAGCTTATTCTTCGTGATGTCCCTAATGAATCAATCCTGGTGAGAGTTAACAATAAGGTTCCAGGATTGGGGCTCCAGCTGGATTCATCAGAATTAAACTTGCTCTATAAAGACAAGTATAACATGGAGGTACCCGATTCATACGAGCATCTTCTGCTTGATGTCATTGACGGGGATAACCATCTTTTCATGAGAAGTGATGAGCTGGCAGCTGCATGGAACATTCTAACACCAATTCTGAACGAGGTGGACAAGGGTAATATATCATTGGAATTGTACGAGATGGGTGGTCGTGGTCCTGTTGGAGCATACTACCTCTGGGCAAAGCATGGTGTTCGTTGGGTAGAGGACTG 1886 0.4194 MSVSFSSLSIPLSESSIRRPIHRSPDTHRINAASFPGAPIMSHSAASGCIVLNGGSSNLCRRFRGLKLWILERLNFQQLSENCRPVMESKRMTSQERNRLKNNLETDFSSEKEPASHGSSVFDAPNDSVTSSESSSLPQTSSSNSPIDVINRAPSLCIAVIGATGELARRKIFPALFALYYSGFLPEDVGIFGYSRKDITDEDLRSVIASTLTCRVDHQENCGDKMDAFLNRTYYINGGYDNRSGMSKLNARMEQIEGGGKANRIFYLSVPQEALLDVASCLASGAQTRKGWNRIIIEKPFGFDALSSLRLTQSLLSKFEENQIYRIDHLLGRNLIENLTVLRFSNLVFEPLWSRAYIHNIQVVLSEDLAVQPGRYFGGYGIIRDIVHSHVLQTIALLAMEPPISLDGEDIRNEKVKVLRSIRKLEPRDVILGQYKASSGNKVDVCLDSLTPTYFASALYIDNARWDGVPFLVKTGLGLIKHQMEIRIQFRHVPGNIYHECIGHNIDRATNELILRDVPNESILVRVNNKVPGLGLQLDSSELNLLYKDKYNMEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPILNEVDKGNISLELYEMGGRGPVGAYYLWAKHGVRWVED 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03216 628 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 156 626 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 87 628 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 341 625 IPR022675 GO:0004345|GO:0006006|GO:0050661
Bva04g03216 628 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 155 627 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PRINTS Glucose-6-phosphate dehydrogenase signature 294 307 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PRINTS Glucose-6-phosphate dehydrogenase signature 387 403 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PRINTS Glucose-6-phosphate dehydrogenase signature 465 491 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PRINTS Glucose-6-phosphate dehydrogenase signature 318 346 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 PRINTS Glucose-6-phosphate dehydrogenase signature 369 386 IPR001282 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 328 626 - -
Bva04g03216 628 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 160 338 IPR022674 GO:0006006|GO:0016614|GO:0050661
Bva04g03216 628 MobiDBLite consensus disorder prediction 106 146 - -
Bva04g03216 628 Gene3D - 153 326 - -
Bva04g03216 628 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 150 341 IPR036291 -
Bva04g03216 628 Gene3D Dihydrodipicolinate Reductase; domain 2 327 627 - -
Bva04g03216 628 MobiDBLite consensus disorder prediction 113 146 - -
Bva04g03216 628 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 87 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03216 Bva-Chr4 26160906 26164891 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03216 K00036 - gmx:100796541 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03216 04 26160906 26164891 Bva04g03216 04 26160906 26164891 ECH