Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03215 ATGTCCTCCAGCACCAGCACCAGTAACTGTTCATGTCACAGCATTCTTGAGACCGCTGGTCAAGGAGCACTTGTTCCCCTATACCAGACATTGCAATCTGCCATTAGCTCCAAGGACCCTGAATCTTCAAATTCCAACAGAATTATCTGGCTGCATTTTGGGGTTAACAGTGATGCGACAAGGTTTGCCATAGAGCATCAAGCTGTCAACGAGGCTACTTTCCGTTGCCCAGATGAATTGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCTTCGGATGGTGGAATTTCACGAACACGAGAGACTTCACTTCCAGTAGAGGAGATGTCCAAGGCATTGGCAAACAAGGGTTATGATGTTATGACATCCGATGATGCAGGCAGGTTTGTGTGCAATTATGTTTACTACCATTCGCTTCGTTTTGCTGAACAGAATGGGATCAAATCCCTCTTTGTGCACGTACCCTTGTTCTCGACAATCGATGAAGAGACCCAAATGCAATTTGTTGCTTCCTTGTTAGAGGTACTTGCTTCTTCTGTAAGCTA 545 0.4606 MSSSTSTSNCSCHSILETAGQGALVPLYQTLQSAISSKDPESSNSNRIIWLHFGVNSDATRFAIEHQAVNEATFRCPDELGWKPQKVPIVPSDGGISRTRETSLPVEEMSKALANKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFSTIDEETQMQFVASLLEVLASSVS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03215 181 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 25 177 IPR036440 -
Bva04g03215 181 Gene3D - 6 181 IPR036440 -
Bva04g03215 181 PRINTS Pyroglutamyl peptidase I (C15) family signature 65 85 IPR000816 GO:0005829|GO:0006508|GO:0016920
Bva04g03215 181 PRINTS Pyroglutamyl peptidase I (C15) family signature 120 136 IPR000816 GO:0005829|GO:0006508|GO:0016920
Bva04g03215 181 PRINTS Pyroglutamyl peptidase I (C15) family signature 148 160 IPR000816 GO:0005829|GO:0006508|GO:0016920
Bva04g03215 181 Pfam Pyroglutamyl peptidase 48 158 IPR016125 -
Bva04g03215 181 CDD Peptidase_C15 49 178 IPR000816 GO:0005829|GO:0006508|GO:0016920
Bva04g03215 181 PANTHER BNAA09G15240D PROTEIN 13 179 - -
Bva04g03215 181 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 13 179 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03215 Bva-Chr4 26157562 26158941 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03215 K01304 - vvi:100252925 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03215 04 26157562 26158941 Bva13g03209 13 22398459 22400930 BWGD
Bva04g03215 04 26157562 26158941 Bva04g03215 04 26157562 26158941 ECH