Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03210 ATGGCGAGGAAGAAGATCAGGGAGTACGACTCCAAGAGGCTGCTCAAAGAGCACCTAAAACGACTCGCCGCCATTGAGCTTGAGATACGATCCGCTCAGGTGACACAATCAACAGATTTCACTGAGTTGACAAACCAACAACCATGGCTTTCATCCACAAAATTGGTTGTGAAGCCTGATATGTTATTTGGAAAGCGTGGAAAGAGTGGTTTAGTGGCTCTGAATTTTGACCAAGCCCAAGTAGTAGAGTTTGTGAAAGCACGCCTTGGCGTTGAGGTTGAGATGGGTGGTTGCAAGGCGCCTATAACAACATTCATTGTTGAACCATTTGTTCCTCATGACCAAGAGTATTACCTCTCCATTGTTTCCGAAAGGCTTGGCTGTACCATCAGCTTCTCAGAATGTGGGGGCatagaaattgaagagaaCTGGGATAGGGTTAAAACTATATTCCTTCCAACAGAGAAAACTATGTCTCTTGAGGCATGTGCTCCATTAATAGCTACACTTCCTTTGGAGGTTCGGCCCATAATTGGTGACTTCATAATTGGCGTGTTTGCTGTCTTTCAAGACCTAGACTTCTCTTTCCTAGAGATGAATCCATTTACACTGGTGAACGAGAAGCCATATCCATTAGATATGAGGGGAGAGTTGGATGATACTGCTGCATTCAAGAACTTCAAGAAGTGGGGCAGTATCGAGTTTCCATTACCTTTTGGAAGAGTTCTGAGCCCTACAGAAAGCTTTATCCATTCCTTGGATGAAAAGACAAGTGCATCTTTGAAATTCACGGTGTTGAACCCAAAAGGACGCATCTGGACAATGGTAGCTGGAGGTGGCGCCAGTGTTATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCAGAACTTGGCAACTATGCAGAGTATAGTGGAGCTCCAAACGAGGAGGAGGTGTTGCAGTATGCCAGAGTTGTCATTgatTGTGCTACTGCCAATCCAGACGGTCGTAAGAGAGCACTTCTTATTGGAGGCGGCATTGCAAACTTTACCGATGTTGCCGCGACTTTCAGTGGGATTATTCGAGCCTTAAGAGAAAAGGAGTCAAAGCTTAAAGCAGCAAGAATGAACATCTATGTCAGAAGAGGTGGTCCAAACTATCAGACTGGTTTAGCAAAGATGCGTGCATTGGGGGAGGAACTGGGAGTACCAATTCAGGTTTATGGGCCTGAGGCCACGATGACTGGTATCTGCAAACAAGCTATTGATTACATCACGTCTGAAGCGTA 1271 0.4461 MARKKIREYDSKRLLKEHLKRLAAIELEIRSAQVTQSTDFTELTNQQPWLSSTKLVVKPDMLFGKRGKSGLVALNFDQAQVVEFVKARLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLSIVSERLGCTISFSECGGIEIEENWDRVKTIFLPTEKTMSLEACAPLIATLPLEVRPIIGDFIIGVFAVFQDLDFSFLEMNPFTLVNEKPYPLDMRGELDDTAAFKNFKKWGSIEFPLPFGRVLSPTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATANPDGRKRALLIGGGIANFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRALGEELGVPIQVYGPEATMTGICKQAIDYITSEA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03210 423 SUPERFAMILY Succinyl-CoA synthetase domains 257 403 IPR016102 -
Bva04g03210 423 Coils Coil 15 35 - -
Bva04g03210 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Bva04g03210 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Bva04g03210 423 Gene3D - 1 233 - -
Bva04g03210 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Bva04g03210 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
Bva04g03210 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
Bva04g03210 423 Gene3D - 240 422 IPR016102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03210 Bva-Chr4 26131870 26136476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03210 1 419 Acyl Lipid Metabolism Gene Families AT1G09430 88.783 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03210 K01648 - zju:107411708 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03210 04 26131870 26136476 Bva04g03210 04 26131870 26136476 ECH