Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03184 ATGTCGTTAATCCAAGAGATGCTACGCTTGAAAGCATTTCGGCCGACGAATGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTCACAGCCGATGCATCAGATCGCGTCTCTGTCTGGAACTGGGAACATCGGCAGGTGATATACGAGCTAAAAGCTGGTGGAGTAGATGAGCGGCGTTTGGTTGGTGCCAAGTTGGAGAAGCTAGCAGAGGGAGAAACAGATTCCAAAGGGAAACCCACAGAAGCCATTCGTGGAGGGAGTGTTAAGCAGGTGAATTTTTACGATGATGATGTACGCTTTTGGCAACTTTGGCGTAATCGCTCTGCAGCTGCGGAGGCTCCATCAGCTGTCCAGCATCTCACTTCAGCCTTTAATGTTCCTGCCCCTTCAACGAAGGGAAGGCACTTTCTTGTCATATGTTGTGAGAACAAAGCTATATTTTTGGACTTGGTGACGATGCGTGGCCGTGATGTACCAAAGCAAGAACTAGATAACAAGTCTCTTCTCTGTATGGAGTTCCTTTATAGAACTGGTGTTGGTGATGCCCCTCTTGTTGCTTTTGGCGCATCTGATGGTGTCATTAGAGTTCTTTCAATGATGACATGGAAGCTTGTGCGAAGGTACACTGGAGGTCATAAAGGATCAATCTCTTGCTTGATGACCTTCATGGCTGCTTCTGGTGAGgCTCTTCTGGTTTCTGGTGGTAGTGATGGATTGCTCATACTATGGAGTGCTGACCATGCACAAGATTCACGAGAACTTGTACCCAAGCTAAGTTTAAAAGCACATGATGGTGGGGTTGTGGCAGTTGAGCTTTCAAGGGTGATTGGAGGTGCTCCTCAGCTTATTACAATTGGTGCAGATAAGACATTAGCCATATGGGATACAGTCTCTTTTAAGgAGCTGCGGCGTATTAAGCCAGTTCCAAAGATGTCTTGCCACAGTGTGGCATCTTGGTGCCATCCTAGAGCTCCAAACCTTGATATCCTGACTTGTGTGAAAGATTCACACATATGGACAATTGAACATCCTACTTATTCTGCTTTAACGAGGCCGTTGTGTGAATTATCGTCGGTTCTTCCTCCACATGCTCTGGCACCTAGTAAGAAACTAAGGGTTTATTGTATGGTAGCACATACATTGCAGCCACATCTTGTTGCTACTGGAACCAACATTGGTGTTATTGTCTGTGAGTTTGATCCTAGATCTCTTCCAGCAGTAGCTCCTCTACTGACATCATCAGATGGTAGAGAGCATTCTGCTGTATATGTAGTTGAAAGGGAGCTAAAGCTACTAAATTTTCAGTTGAACAACTCAGCAAATCCATCTCTTGGAAATAATACTTCATTGTCAGAAACAGGAAGATCTAAGGGAGAATTTTTTGAGCCATTACCTGTCAAGCAGGGGAAGAAGCACATCAGTACTCCTGTTCCACATGATTCATATTCAGTTCTTTCTGTGAGCAGTTCAGGAAAGTATCTTGCAATCGTGTGGCCAGATATTCCTTACTTCTCTGTCTACAAGGTTAGTGACTGGTCAATTGTTGATTCCGGCAGTGCAAGGCTTCTAGCTTGGGATACCTGTCGTGATAGATTTGCTATATTGGAATCAGCATTACCTCCTAGAATTCCTGTAATTCCCAGGGGGACTTCATCAAGAAAGGCAAGAGAAGCTGCTGCAGCTGCGGCACAAGCGGCAGCAGCTGCAGCTTCTGCAGCTTCGACAGCCTCTGTTCAAGTCCGCATCTTGTTAGATGATGGAACATCAAATATACTGATGAGATCTGTGGGTGCACGCAGTGAACCAGTTATCGGTTTGCATGGTGGGGCACTACTTGGTGTTGCATATCGGACATCAAGGAGAGTTAGTCCAGTTGCTGCTACTGCTATTTCAACAATTCAGTCCATGCCCTTGTCAGGCTACGGAAGCAGtggcctttcttcttttactacATTTGATGATGGACTTTATTCGCACAGGTCTCCAGCTGAAGCAGCACCTCAAAACTTCCAGCTATATAGTTGGGAGACTTTTGAGCCTGTGGGTGATTTACTTCCTCAACCTGAATGGACTGCCTGGGACCAAACTGTTGAGTACTGTGCTTTTGCATATCAACAGTACATAGTCATATCTTGTTTGCGCCCACAATATAGATACCTGGGAGATGTTGCCATTCCGAATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTTTTTGTGGTTACACCGACTACTGTAGAAGTTGTGTTCGTGGATGCTGGGGTTACACAAATGGACATAGAAACTAAGAAGATGAAAGAGGAGCAGAAAGTCAAAGAGGCACAAGCAAGAGCTGTAGCTGATCATGGAGAGCTAGCACTAATCTCAGTGGACGGTCCGCAGGCTACTGCAGAAGAAAGAATATCGTTGAGGCCACCAATGCTACAGGTGGTGCGATTGGCTTCATTTCAGCATGCTCCTTCTGTGCCACCTTTCATAACATTGCCAAAGCAATCTAGAGTTGATAGCGATGACATGGGCAtgacagaagaaagaaaagccaaTGAGGTAGCAGTTGGTGGTGGGGGAGTGTCGGTAGCAGTTACTCGCTTTCCGATGGAGCAGAAACGTCCTGTTGGACCTCTTGTTTTGGTAGGTGTCAGAGATGGAGTGCTTTGGCTAATTGACagGTACATGTGTGCTCATGCCATATCGTTGAGTCATCCAGGTATTCGGTGCCGATGTCTTGCTGCTTATGGGGATGCTGTTAGTGCAGTGAAATGGGCGAGTAGGCTTGGAAGAGAACACCATGATGATTTAGCAcaatttatgcttggaatGGGCTATGCTAATGAAGCTCTTCATTTGCCAGGAATATCTAAGAGGCTGGAGTTTGATCTGGCAATGAAGAGCAATGATTTGAAAAGGGCTCTTCAATGCCTTCTTACCATGAGTAACAGCAGGGACATAGGAAATGATAGTACTGGACTTGGTTTGAAcgacattcttaatttaacagagaaaaaagaagatgttGTCGAGACTGTTCAGGGTATAACGAAATTCGCAAAAGAGTTCTTGGATCTTATTGACGCCGCGGATGCTACTGCACAAGGTGAAATTGCTCGTGAAGCTCTAAAGAGATTAGCTGCGACAGTTTCAGTAAAAGGTGCTTTACAGGGTCATGAGTTGAGAGGATTAGCACTACGGCTTGCAAATCACGGAGAGTTGACACGGCTAACAGGTTTGGTGAACAATTTGGTCACTCTTGGTTTGGGACGAGAAGCTGCATTTGCTGCTGCTGTTTTGGGAGACAACGCACTAATGGAGAAGGCGTGGCAGGACACTGGGATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGGCGTCCAACTTCAAAGAACTTGGTTCAGGCCTGGAACCAAATGCTGCAGAGGGAGGTTGAACCAACTCCTTCGCAGAAGACAGATGCTACGGCTGCATTTCTTGCCTCTCTTGAGGAGCCCAAGCTTTCAAGTTTGGCAGAAGCAGGGAAGAAACCGCCAATTGAAATCCTACCTCCGGGGATGGTATCTCTCTCTGCTCCTATCTCCTTACAGAAGAAACCGGTTTCTTCTGCTGCTCCGAATTCGAATTTGCAACAGCCACCGGCCAAGCCATTGGCACTGGAAGCAGCTCCTACCACAACAGTAGCGCCGCCAAGTGCTTCGGAGCAGTCTGAATCCGCAACTGCACCAGTGAATGATTCGCATCCATCACAACCAACAACAGACTCCGCGCCAACTCCTGGGGCTCCTCAACCCCAACCACAATCAGGTGAGACCGTTGTAGACAATGAAGTTCCTTCCTCTGCACCTGCTAGTGATGTAATTCAGGTTGCTGGTGGTGAAACTGAAACTGTACAAGCAGTCCCTTCAAGCAATTCAACATCAGCAGAAATCACATCACCAGCACCGGAGGTTCAGCAGACAAATGTTCCAACGACAGTACCTGTGAGCGACTTCCTCGCATG 4010 0.4581 MSLIQEMLRLKAFRPTNDKIVKIQLHPTHPWMVTADASDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETDSKGKPTEAIRGGSVKQVNFYDDDVRFWQLWRNRSAAAEAPSAVQHLTSAFNVPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLYRTGVGDAPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGSISCLMTFMAASGEALLVSGGSDGLLILWSADHAQDSRELVPKLSLKAHDGGVVAVELSRVIGGAPQLITIGADKTLAIWDTVSFKELRRIKPVPKMSCHSVASWCHPRAPNLDILTCVKDSHIWTIEHPTYSALTRPLCELSSVLPPHALAPSKKLRVYCMVAHTLQPHLVATGTNIGVIVCEFDPRSLPAVAPLLTSSDGREHSAVYVVERELKLLNFQLNNSANPSLGNNTSLSETGRSKGEFFEPLPVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESALPPRIPVIPRGTSSRKAREAAAAAAQAAAAAASAASTASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRVSPVAATAISTIQSMPLSGYGSSGLSSFTTFDDGLYSHRSPAEAAPQNFQLYSWETFEPVGDLLPQPEWTAWDQTVEYCAFAYQQYIVISCLRPQYRYLGDVAIPNATSAVWHRRQLFVVTPTTVEVVFVDAGVTQMDIETKKMKEEQKVKEAQARAVADHGELALISVDGPQATAEERISLRPPMLQVVRLASFQHAPSVPPFITLPKQSRVDSDDMGMTEERKANEVAVGGGGVSVAVTRFPMEQKRPVGPLVLVGVRDGVLWLIDRYMCAHAISLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYANEALHLPGISKRLEFDLAMKSNDLKRALQCLLTMSNSRDIGNDSTGLGLNDILNLTEKKEDVVETVQGITKFAKEFLDLIDAADATAQGEIAREALKRLAATVSVKGALQGHELRGLALRLANHGELTRLTGLVNNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTSKNLVQAWNQMLQREVEPTPSQKTDATAAFLASLEEPKLSSLAEAGKKPPIEILPPGMVSLSAPISLQKKPVSSAAPNSNLQQPPAKPLALEAAPTTTVAPPSASEQSESATAPVNDSHPSQPTTDSAPTPGAPQPQPQSGETVVDNEVPSSAPASDVIQVAGGETETVQAVPSSNSTSAEITSPAPEVQQTNVPTTVPVSDFLA 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03184 1336 MobiDBLite consensus disorder prediction 1268 1285 - -
Bva04g03184 1336 ProSiteProfiles Trp-Asp (WD) repeats profile. 265 309 IPR001680 GO:0005515
Bva04g03184 1336 Gene3D - 912 1160 - -
Bva04g03184 1336 PANTHER TSET COMPLEX MEMBER TSTF 7 1315 - -
Bva04g03184 1336 SUPERFAMILY WD40 repeat-like 9 316 IPR036322 GO:0005515
Bva04g03184 1336 SMART WD40_4 258 300 IPR001680 GO:0005515
Bva04g03184 1336 SMART WD40_4 206 249 IPR001680 GO:0005515
Bva04g03184 1336 SMART WD40_4 6 45 IPR001680 GO:0005515
Bva04g03184 1336 MobiDBLite consensus disorder prediction 1224 1336 - -
Bva04g03184 1336 Gene3D - 7 433 IPR015943 GO:0005515
Bva04g03184 1336 Coils Coil 762 782 - -
Bva04g03184 1336 MobiDBLite consensus disorder prediction 1229 1257 - -
Bva04g03184 1336 MobiDBLite consensus disorder prediction 1298 1330 - -
Bva04g03184 1336 PANTHER BNAC07G49640D PROTEIN 7 1315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03184 Bva-Chr4 25978957 25987950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03184 - - gmx:100777567 2152.87