Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03181 atgtCGATACCGAAGGAGCTGGAGCAGGTGATGAAGTCGAGAGGAGGGTCGGTGCTTGGACAGAAGACCATTCTTAAGAGTGACCATTTCCCTGGTTGCCAGAACAAACGCTTGTCTCCCCAGATCGAAGGAGCTCCCAATTATCGTCAGGCTGACTCATTACATGTTCACGGTGTCGCCATCCCAACAAGTGATGGAATTCGGAATGTTCTTAAGCATATTGGTGCTCAAATAGAGGGGAAGAGGACAAAAGTTCTTTGGATTAGCCTTCGTGAGGAACCGGTTGTGTACATTAATGGACGCCCCTTTGTTTTGCGTGATGTGGAGAGACCCTTTTCAAACCTCGAGTATACGGGCATCAATAGGGAAAGGGTTGAACAAATGGAAGCTCGTTTGAAAGAAGACATCTTGATGGAAGCCGCAAGATATGGAAATAAGATCCTTGTAACTGATGAACTGCCAGATGGTCAGATGGTGGACCAATGGGAACCAGTGTCATGTGATTCTGTGAAGACACCACTAGAGGTGTATGAGGAACTGCAAGCAGAGGGATACCTTGTTGATTACGAGCGTGTACCTATAACTGATGAAAAGTCCCCAAAGGAACaggattttgatattttgGttcataaaatttctcaagCTGATGTAGATACagagataatttttaattgtcaaATGGGGCGTGGGCGAACAACAACTGGAATGGTCATTGCAACTTTGATTTACCTCAACCGAATTGGAGCTTCTGGTATTCCGAGAAGCAATTCAATTGGTAGAGTTACTCAAAGTACCACTAATGTTGCTGATCATTTGCCTAACTCAGAGGAAGCAATTCGTAGGGGAGAATATGCAGTCATAAGAAGCTTGATTCGGGTGTTGGAGGGAGGTGTTGAAGGGAAAAGACAAGTGGACAAAGTTATTGACAAGTGTGCTTCAATGCAGAACTTGCGAGAAGCAATTGCCACATATCGTAACAGCATTTTGAAACAACCAGATGAAATGAAAAGGGAGgcatcactttcttttttcgtgGAGTACTTGGAGAGATACTACTTTTTGATATGCTTTGCCGTGTACATCCATTCAGAAAGGGCCTCTCTAAATTCTAGTTCCTGTGGTCAGAGCAGTTTTGCTGAGTGGATGAGAGCTAGGCCAGAACTTTACAGCATTATTCGCAGGTTGGTCAGGAGAGATCCAATGGGTGCACTTGGGTATTCTAGTTTAAAACCATCTCTAAAGAAGATGGCTCAATCTACTGATGGCCGCCCTTCTGAGATGGGTATTGTTGCTGCCTTGAGAAAGGGAGAGGTTCTTGGAAGTCAAACTGTTCTAAAAAGTGATCATTGTCCGGGTTGTCAAAACCCAACTTTACCTGAGAGAGTGGAGGGGGCACCAAATTTCAGAGAAGTTCCTGGATTTCCTGTTTATGGGGTGGCAAATCCAACTATTGATGGTATTTGTTCTGTCATTCGTAGGATTAGCAGCTCTAAAGGTGGACGGCCGGTTCTTTGGCATAATATGAGAGAAGAACCTGTTATTTACATAAATGGCAAGCCATTTGTTCTCCGTGAAGTTGAAAGACCATGTAAAAACATGCTGGAGTATAcgGGAATTGATTGTGGAAGGGTGGAAAAAATGGAAGCTCGATTAAAAGAAGATATTCTACGAGAAGCTGAACATTATGGAAGTGCTATAATGGTTATTCATGAAACAGATGATGGACAGATATTTGATACTTGGGAGCATGTCTCCTCTGATGCAATTCAAACCCCACTTGAAGTTTTCAAGAGCCTGGAGGCTGAAGGCTTTCCCATTAAATATGCACGTGTACCTATCACTGATGGAAAAGCTCCTAAAAGTTCTGACTTCGATACATTGGCAGTTAATATTGCTTCTGCTCCAAAGGACGctgcttttgttttcaattgtCAGATGGGTAGGGGTAGGACAACCACTGGTACTGTCATAGCTTGCCTTCTGAAACTTCGCATTGATTATGGAAGGCCCATTAAAATCCTGGATGATGGTTTCACTCATGAAGAAGGGATCAATGCTTCTTCAAGTGGAGATGAAACAAAGACAGATGAGAAACAAAATCGTGTTTTTGGCATAAACGATATCCTGTTGTTATGGAAGATAACCACATTATTTGACAATGGGGTGGAATGCCGGGAGGCCTTAGATGCTATCATTGATAGATGTTCTGCCCTTCAAAACATCCGCCAAGCTGTTCTGGAATACAGGAAAGTATTCAATCAACAACAAGTTGAGCCTAGGGTAAGGAGGGTAGCCTTGAATCGTGGGGGTGAGTACTTGGAAAGGTACTTCCTTCTAATTGCTTTTGCAGCATATCTTGGAAGCGATGCATTTGATGGCTTTTGTGGACAAGGGCAATCCAAAATGACATTTAAGTGTTGGCTGCATCGGAGGCCAGAGGTTCAGGCTATGAAATGGAGCATCAGATTGAGGCCAGGGCGATTTTTCACTGTCCCAGAAGAGTTGAGAGCACCGCATGAGTCTCAGCATGGAGATGCAGTGATGGAGGCCATTGTCAAGGGCCGAAATGGTTCTGTATTGGGGAAAGGATCCatactgaaaatgtatttctttCCGGGTCAAAGAACTTCCAGTCGCATACAAATACATGGTGCACCACATGTTTACAAGGTTGACGAATACCCTGTATATAGCATGGCAACTCCAACCATCTCTGGTGCCAAGGAGATGCTAGCATATTTAGGTGCTAAGCCTAAAGCAGAAGCCTCGGATGCTCAAAAAGTTATATTGACTGATTTGAGAGAAGAAGCAGTTGTTTATATCAATGATACTCCCTTTGTCCTAAGGGAGTTAAATAAACCTGTTGATACGCTCAAGCATGTGGGGATCACTGGTCCAGCGGTGGAACACATGGAGGCACGActaaaagaagatattttatcTGAGGTTAGACAGTCTGGTGGACGGATGCTATTACATCGTGAAGAATACAACCCTTCAACAAATCAGACCAGCGTTGTTGGATATTGGGAAAACATTTCAGTAGATGATGTGAGGACAACTGTAGAAGTGTATTCTTCTCTCATTGCTGAGGGGCATAACATTGTCTATCGAAGGATACCATTGACGCGCGAGAGAGATGCTTTGGCCTCTGATGTTGATGCAATCCAGTATTGTAAAGATGAGTCTGCAGGGAGTTACCTTTTTGTGTCCCACACAGGTTTTGGTGGAGTCGCTTATGCAATGGCTATCATCTGTATCAGACTAGGTGCAGAGGTAAACTTCACATCCAAAATCCCACAACCACTGTTGGGTCCTCACACATCTCCAGTGACCGAAGAAACACGCAGGATGGGTGACTACCGTGACATATTAAGCCTTACAAGAGTCCTTCTACATGGTCCCCAAAGCAAAGCTGATGTTGACATTATCATTGAAAGATGTGCAGGCGCAGGGCATTTACGAGATGATATTCTTTATTTCCGAAAAGAATTTGAGAAGTTTACTGATGGTGATGATGAAGAACGAGCATCTCTTATGGACATGGGTATCAAAGCTTTGAGGCGATATTTTTTCCTGATCACATTCAGGTCCTATCTCTACTGCACTTCTCCTGCCGATATGGAATTTTCTGCTTGGATGGATGCAAGACCTGAGCTCGGTCATCTCTGTAATAATCTtagaattgataaata 3695 0.4227 MSIPKELEQVMKSRGGSVLGQKTILKSDHFPGCQNKRLSPQIEGAPNYRQADSLHVHGVAIPTSDGIRNVLKHIGAQIEGKRTKVLWISLREEPVVYINGRPFVLRDVERPFSNLEYTGINRERVEQMEARLKEDILMEAARYGNKILVTDELPDGQMVDQWEPVSCDSVKTPLEVYEELQAEGYLVDYERVPITDEKSPKEQDFDILVHKISQADVDTEIIFNCQMGRGRTTTGMVIATLIYLNRIGASGIPRSNSIGRVTQSTTNVADHLPNSEEAIRRGEYAVIRSLIRVLEGGVEGKRQVDKVIDKCASMQNLREAIATYRNSILKQPDEMKREASLSFFVEYLERYYFLICFAVYIHSERASLNSSSCGQSSFAEWMRARPELYSIIRRLVRRDPMGALGYSSLKPSLKKMAQSTDGRPSEMGIVAALRKGEVLGSQTVLKSDHCPGCQNPTLPERVEGAPNFREVPGFPVYGVANPTIDGICSVIRRISSSKGGRPVLWHNMREEPVIYINGKPFVLREVERPCKNMLEYTGIDCGRVEKMEARLKEDILREAEHYGSAIMVIHETDDGQIFDTWEHVSSDAIQTPLEVFKSLEAEGFPIKYARVPITDGKAPKSSDFDTLAVNIASAPKDAAFVFNCQMGRGRTTTGTVIACLLKLRIDYGRPIKILDDGFTHEEGINASSSGDETKTDEKQNRVFGINDILLLWKITTLFDNGVECREALDAIIDRCSALQNIRQAVLEYRKVFNQQQVEPRVRRVALNRGGEYLERYFLLIAFAAYLGSDAFDGFCGQGQSKMTFKCWLHRRPEVQAMKWSIRLRPGRFFTVPEELRAPHESQHGDAVMEAIVKGRNGSVLGKGSILKMYFFPGQRTSSRIQIHGAPHVYKVDEYPVYSMATPTISGAKEMLAYLGAKPKAEASDAQKVILTDLREEAVVYINDTPFVLRELNKPVDTLKHVGITGPAVEHMEARLKEDILSEVRQSGGRMLLHREEYNPSTNQTSVVGYWENISVDDVRTTVEVYSSLIAEGHNIVYRRIPLTRERDALASDVDAIQYCKDESAGSYLFVSHTGFGGVAYAMAIICIRLGAEVNFTSKIPQPLLGPHTSPVTEETRRMGDYRDILSLTRVLLHGPQSKADVDIIIERCAGAGHLRDDILYFRKEFEKFTDGDDEERASLMDMGIKALRRYFFLITFRSYLYCTSPADMEFSAWMDARPELGHLCNNLRIDK 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03181 1231 Gene3D Protein tyrosine phosphatase superfamily 444 699 IPR029021 -
Bva04g03181 1231 Gene3D Protein tyrosine phosphatase superfamily 22 290 IPR029021 -
Bva04g03181 1231 Gene3D Protein tyrosine phosphatase superfamily 867 1099 IPR029021 -
Bva04g03181 1231 PANTHER METAL ION-BINDING PROTEIN 605 1231 - -
Bva04g03181 1231 CDD PTP_paladin 434 735 - -
Bva04g03181 1231 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 605 1231 - -
Bva04g03181 1231 CDD PTP_paladin 14 311 - -
Bva04g03181 1231 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 430 664 IPR029021 -
Bva04g03181 1231 Pfam Inositol hexakisphosphate 88 242 - -
Bva04g03181 1231 Pfam Inositol hexakisphosphate 932 1087 - -
Bva04g03181 1231 Pfam Inositol hexakisphosphate 506 662 - -
Bva04g03181 1231 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 424 604 - -
Bva04g03181 1231 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 247 IPR029021 -
Bva04g03181 1231 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 850 1076 IPR029021 -
Bva04g03181 1231 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 339 - -
Bva04g03181 1231 SMART PTPlike_phytase_2 931 1089 - -
Bva04g03181 1231 SMART PTPlike_phytase_2 88 243 - -
Bva04g03181 1231 SMART PTPlike_phytase_2 506 662 - -
Bva04g03181 1231 PANTHER METAL ION-BINDING PROTEIN 424 604 - -
Bva04g03181 1231 PANTHER METAL ION-BINDING PROTEIN 2 339 - -
Bva04g03181 1231 PANTHER METAL ION-BINDING PROTEIN 343 484 - -
Bva04g03181 1231 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 343 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03181 Bva-Chr4 25959078 25968290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03181 - - gmx:100788113 2138.23