Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03180 ATGGAGTGGAATAGTCTCATCAGAAAGTTGATTGTGATGGCTTTTATGGTGGCCTTGCTTATCCAACATGGGAGCTGCCACGGTGGTCGtcgccaccaccaccaccatcatCATCACGGTCATCGTGGTCATCATCACCATCATCATGGTCATCATCACCCGCCAACCAAAGGACATCACTATGGTAGCTTCGTTCAAAGAGTTGGAACCCATTTCATTTTGAATGGGAAGCCACACTACGTAAATGGATTCAATTCCTACTGGATGATGTACATGGCATCCGATCCATCCACAATGTCCAAGGTCACTACCACTTTCCAAGAAGCATCCCAGCATGGCTTAAACGTAGCAAGAACTTGGGCTTTCAGCGATGGAGGTTACAGATCCCTTCAGGTTTCCCCTGGTTCTTATGACGAAGCTGTCTTCgagGGACTGGATTTTGTGGTCTCAGAAGCTGGGAAATATGGGGTTCGATTGATACTGAGTTTGGTGAACAACTGGCACGATTATGGTGGCAAAAATCAATATGTTCAGTGGGCAAGGGATCGGGGACAGTATGTGAACAACGAAGATGACTTTTATACAAACCCTGTTGTTAAGCAATACTACAAGAACCATATTCAGGCTGTGCTTACCAGAAAAAACACAATAACTGGAGTAGCATACAAAGATGATCCAACCATTTTTGCATGGGAACTCATGAATGAACCTCGTTCCCAAACAGACTACTCAGGCAAAAGTATCCAGGAGTGGGTGGAAGAGATGGCTGCCTATGTGAAATCCATCGATAGAAATCATTTACTAGAAATAGGACTTGAAGGGTTTTACGGTGAATCAACGCCAGAAAAGAAACAGTTCAATCCTGGATACACAGTTGGAACTGATTTCATTTCCAACAATCAAGTTCCCGAAATTGATTTCGCCACCATCCATCTTTACCCAGACCaatgGGTATCGAGCACAGATGAAGCAGCTCAAGCTGCATTTGTTGACAAATGGGTACAAGCCCATATACAAGATTCTGATACTGTTTTAAAGAAGCCCATTCTTCTCAGCGAGTTCGGCAAGTCAAGGTGGTCATCAGGATATACCGAGGAAAAAAGGAACAGCTACTTTGAGGAGCTGTACAACGCAATATACAAGAGTGCTAGCAGTGGTGGCTCATGTGCAGGTGGCCTTTTCTGGCAGCTAATGGCGCAAGGAATGGATGGCTTCCGTGACGGGTACGAAGTTATCTTCGAGGAGAGCCCTTCAACTGCCGACGTTATCACTCAACAATCTCACAAGATGTCAAGTCTTACACATCGCAGAACTAGGCACCCTTA 1325 0.44 MEWNSLIRKLIVMAFMVALLIQHGSCHGGRRHHHHHHHHGHRGHHHHHHGHHHPPTKGHHYGSFVQRVGTHFILNGKPHYVNGFNSYWMMYMASDPSTMSKVTTTFQEASQHGLNVARTWAFSDGGYRSLQVSPGSYDEAVFEGLDFVVSEAGKYGVRLILSLVNNWHDYGGKNQYVQWARDRGQYVNNEDDFYTNPVVKQYYKNHIQAVLTRKNTITGVAYKDDPTIFAWELMNEPRSQTDYSGKSIQEWVEEMAAYVKSIDRNHLLEIGLEGFYGESTPEKKQFNPGYTVGTDFISNNQVPEIDFATIHLYPDQWVSSTDEAAQAAFVDKWVQAHIQDSDTVLKKPILLSEFGKSRWSSGYTEEKRNSYFEELYNAIYKSASSGGSCAGGLFWQLMAQGMDGFRDGYEVIFEESPSTADVITQQSHKMSSLTHRRTRHP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03180 441 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 38 433 - -
Bva04g03180 441 SUPERFAMILY (Trans)glycosidases 64 422 IPR017853 -
Bva04g03180 441 Gene3D Glycosidases 62 434 - -
Bva04g03180 441 PANTHER - 38 433 IPR045053 GO:0004553
Bva04g03180 441 MobiDBLite consensus disorder prediction 27 58 - -
Bva04g03180 441 Pfam Cellulase (glycosyl hydrolase family 5) 75 372 IPR001547 GO:0004553|GO:0071704
Bva04g03180 441 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03180 Bva-Chr4 25956494 25958275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03180 62 433 Glycoside Hydrolase AT5G66460 59.140 3.96e-167 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03180 K19355 - gmx:100791612 616.69